Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2886 |
Symbol | metX |
ID | 4080679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3037204 |
End bp | 3038325 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011270 |
Product | homoserine O-acetyltransferase |
Protein accession | YP_617924 |
Protein GI | 103488363 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2021] Homoserine acetyltransferase |
TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCC GGTTGCACGA AATCCAGCAT CAAAGCGTGA CGATTCAGGC GCCGCTGCCG CTCGACAGCG GACAAAGCCT GCCTTCGGTG ACGATCGCCT GGCAAAGCTA TGGCGCGCTC AACGCCGACA AGTCGAACGC CGTGCTCATC TGCCACGCGC TCACCGGCGA CCAATATGTC GCGAGCGACC ATCCCGCGAC GGGCAAGCCC GGCTGGTGGG CGCGCATGGT CGGTCCCGGC AAGCCGATCG ACACCGACCG TTTCCACGTC ATTTGCGCCA ATGTGCTCGG CAGCTGCATG GGGTCGAGCG GGCCGGCGAG CCCCGACGCG GCCACCGGCG CGCCGCTCGG CATGGCCTTT CCCGTCATCA CCATCGGTGA CATGGTGCGC GCGCAGGCGA TGCTGCTCGA TCATCTCGGT ATCGCGCGGC TGCACGCGGT GGTCGGCGGA TCGATGGGCG GGATGCAGGC GCTCGCCTGG GCCGCGGCCT TTCCCGATCG GCTCGGCTCG GCGATCGTCA TCGCCAGCGC GGCACGCCAT TCGGCACAGA ATATCGCGTT TCACGAGGTC GGGCGCCAGG CGATCATGGC CGACCCCGAC TGGCAGGACG GCCAATATTA TGGCAGCGCG CGCGCGCCGA CCAAGGGGCT CGCGGTCGCG CGGATGGCGG CGCACATCAC CTATTTGTCC GAAGCCGGGC TGACCGAAAA GTTCGGCCGC CGCCTGCAGG CGCGCGCGAT CAAGAGCTTT GGTTTCGATG CCGATTTTCA GGTCGAATCC TATTTGCGGC ATCAGGGGCT GGCCTTCACC GACCGCTTCG ACGCCAACGC CTATCTCTAT ATCACGCGCG CGATGGACTA TTTCGACCTT GCCGAACCGC ACGATGGTCG CCTTGCGGGC GCCTTTGCGG GGGCGAAGGA TGTGCGCTTC ACGCTCGTCA GCTTCGACAC CGACTGGCTT TACCCCACCG CCGAATCGCG CCGCATCGTC CAGGCGCTGC AAAGCGTCGG CGCGGCGGCA AGCTTCGTCG AGCTGTCGGC GCCCTTCGGG CACGACAGCT TCCTCCTCGA TGTCCCCGCG CTCGACCGGA TCGTCGCGGG CGCGCTCGGG GGCGGACGCT GA
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Protein sequence | MASRLHEIQH QSVTIQAPLP LDSGQSLPSV TIAWQSYGAL NADKSNAVLI CHALTGDQYV ASDHPATGKP GWWARMVGPG KPIDTDRFHV ICANVLGSCM GSSGPASPDA ATGAPLGMAF PVITIGDMVR AQAMLLDHLG IARLHAVVGG SMGGMQALAW AAAFPDRLGS AIVIASAARH SAQNIAFHEV GRQAIMADPD WQDGQYYGSA RAPTKGLAVA RMAAHITYLS EAGLTEKFGR RLQARAIKSF GFDADFQVES YLRHQGLAFT DRFDANAYLY ITRAMDYFDL AEPHDGRLAG AFAGAKDVRF TLVSFDTDWL YPTAESRRIV QALQSVGAAA SFVELSAPFG HDSFLLDVPA LDRIVAGALG GGR
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