| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2884 |
|---|
| Symbol | |
|---|
| ID | 4080677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3036057 |
|---|
| End bp | 3036569 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638011268 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617922 |
|---|
| Protein GI | 103488361 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACG CTCAATCAGC GCGAATGACT TTTGCCAACA TGCTCGGCAC GCTCGACCAT
CTTGTCGGCA AGGCTATAGA TGCCAAGATG CCGGACGACG TGCTGAGGGC ACAGCTGACC
GAGGATATGT TCCCGCTCGA GCTTCAGTTC CGCGTCGCTT TGAACCAGGT GCTTCTGGCC
CTCAATCAAG TCGGTGGAAC GACGGTCCCG CTCGAAGAAA CCACGTACAC GTCGCTTGCA
GAGGTTCGTC AGCGGATTGC CGCGGTCCGC GCGCTCGTTG ATCAGACCGA TCCTGCTCGA
TGGGCGGACG CCGAAGCAAA GGTCGATCTG ACATTGCCGA ATGGCGTGCG CTTTGTGATG
TCCTCCGAAG AGGATGTTCG CGACTGGATC ATGCCGAACT TCTATTTTCA CGTGACGATG
GCGTACGCCT TGCTGCGCGA TGCGGGGCTG GCCATCGGCA AGATGGATTT CATCCCGCAT
ATGGCCCGCC ACAAGGTGTC GGCCGCGGAC TAG
|
|---|
| Protein sequence | MPYAQSARMT FANMLGTLDH LVGKAIDAKM PDDVLRAQLT EDMFPLELQF RVALNQVLLA
LNQVGGTTVP LEETTYTSLA EVRQRIAAVR ALVDQTDPAR WADAEAKVDL TLPNGVRFVM
SSEEDVRDWI MPNFYFHVTM AYALLRDAGL AIGKMDFIPH MARHKVSAAD
|
|---|
| |