| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2882 |
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| Symbol | |
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| ID | 4080675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3032827 |
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| End bp | 3035187 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011266 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617920 |
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| Protein GI | 103488359 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCTT TCGCTCGCAC GCTGCGCCGC GCCATCCTTG CCACCAGCAC GCTTTCGGTG
CTCGCCTTCG CTCCTGCCGC CATCGCGCAG GACGCTGGCG TCGAACCCGC CGGTGCCAGC
GAGGATAGCG GCGACAATGA AATCATCGTC ACCGCGCGCC GTCGCGACGA GCGGCTGATC
GACGTGCCGG TCGCGATCAC CGCCTATTCG GGTGACGCGC TGGCCAAGGC GGGCGCGATC
GACATCACCG ACATCGGCGC GACGACGCCG AACACGACGC TGGAGGCGTC GCGCGGCACC
AATTCGACGC TCAGCGCCTT CATCCGCGGC GTCGGGCAGC AGGATCCGGT TTCGGGCTTC
GAACAGGGCG TCGGCATCTA TCTCGACGAT GTATACCTCA ACCGCCCGCA GGCCGCGGTG
CTCGACATTT ACGAGGTCGA GCGGATCGAG GTGCTGCGCG GGCCGCAGGG CACGCTTTAT
GGCCGCAACA CGATCGGCGG CGCGGTCAAA TATGTGACCA AGCCGCTGCC GCAGGAGTTT
TCGCTGAGGA TCAAGGGCAC CTATGGCAGC TATGACCAGG CCGACCTGGT GGTCAGCGCC
AGCGCGCCGG TCAGCGACCT GCTCCGCGTC GGCGTCGCGG GGGCGCGGCT GTCGCGCGGC
GGGTTCGGCG ACAATCTGAC CAACGGGCTC GAAAACTACA ACAAGGACGT CTGGGCCGGG
CGCGGCACGG TCGAGCTTGG CGGCTATGGC GAGCCGGTGC TCATCCGCAT TTCGGGCGAT
TATACCAAGG ACAAGAGCGC GCCGCGCGGC GGCCACCGCC TGATCCCCAG CCTCGCGACG
GGCGCCCCCG TCCTCGACAA TGTCTTCGAC ACCCGCGGCG GCCTGAACGA CCCCAAACAG
GAGATCGAGG CCTATGGCCT CGCCATGAAC GTATCCGCCG AGCTCAGCGA CACGGTGACG
CTGCGGTCGA TCAGCGCGTG GCGCAAGGAC AAGTCGGCGA CCCCGATCGA TTTCGACGCG
CTGCCCGCGG TCGACGTCGA TGTCCCCGGC TTTTATTTCA ACGAACAGAT CAGCCAGGAA
CTCCAGCTGC TTTATGAGGG CGATCGCCTG AAGGGCCTGC TCGGCTTCTA TTATCTCGAC
GCGACCGCCG ACACCTTGTT CGACGTCCGC ATCTTCAACA CCTTTGCCGG GCTGACCGCC
TTTACCGAGG CCGATGTCGA TACCACGACC TTCGCCGTCT TCGGCGATTT CACCTATGAT
TTCAGCGATC AGTTCAGCCT GTCGGTCGGC GGCCGCTACA CCTGGGACAA GCGCACCGCG
TCGATCCTGC GCCAGAATTA TCTCGGCGGC GGATCGCCCG TCTTCGGCGG CGCGGGCGTG
CCCTTCGGCG CACCCAGCAC CAATTTCGAC GGCAGCCGCA AGTTCAACAA GTTCACCCCG
CGCGTCTCGC TCCAATATCA GCCGACGAGC GACCATAATT TCTACGCCAG CTATTCGCAG
GGGTTCAAGG GCGGCGGCTT CGATCCGCGC GGCGTCGGCG TCAACGCACC GGCCGCCATT
CCGGGCAGCC CGACCGATGC CGAGGTCGCG TCCTTCCTGA GCTTCCTTCC CGAACAGGTC
GACAGCTATG AAGTCGGCTA CAAGGGCAGC CTGATGGACG GCGCGGTCAA CGTCGCGCTC
GCGGCCTTCT ACGCCGATTA TTCGGACGTC CAGATTCCGG GTTCGGTTGC CTGCACCGTC
GGCGGCCTGC CGACTTTCTG CGGCGTCGTC TCGAACGCGG GCAAGGCGAC TTTCAAGGGG
CTGGAGTTCG AAGGCCGCGC GCGCCTTGCC GAAGATATGG CGGCGGCCGG CGATCGGCTG
ACGCTGTCGA CCGCGCTGGG CTATATCGAC GCGCAATATA AGGAATATGT CACCAACATC
GGCGGCGTAC CCACCGATGT CGCCGATTTC CGCGAGGTGC AGAACACGCC GAAATGGACC
GCCAGCGGCA CGCTCGCCTA TTCGACCCCG GTCGGCGACG GCGAGATCCG CTTCGGCACG
ACGCTGTCCT ATCGCAGCAA GACCCACCAG TTCGAAATCC CGAACCCCTA TATCGACCAG
AAGGGGTTTG CGCTGTGGGA TGCGAGCCTG GTCTATACCG CGCCCGACGA TCGCTGGAGC
CTCGGGCTGT TCGGCAAGAA TCTGACGAAC AAGAAGTACA AGACCTCGGG CTATACCTTC
ATCGTCGTCG ATCCCGTAAC GGGCGTCCCG GCCCTCGGCG CCAACGGCCT GCCGCGCTCG
GCACTCGGCA CCGAGGGCAC GCTCACCGCC TTCTACGGCA ACCCGCGGCA GGTTTTCGTC
ACGGGCACGG TCAAGTTCTG A
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| Protein sequence | MRPFARTLRR AILATSTLSV LAFAPAAIAQ DAGVEPAGAS EDSGDNEIIV TARRRDERLI
DVPVAITAYS GDALAKAGAI DITDIGATTP NTTLEASRGT NSTLSAFIRG VGQQDPVSGF
EQGVGIYLDD VYLNRPQAAV LDIYEVERIE VLRGPQGTLY GRNTIGGAVK YVTKPLPQEF
SLRIKGTYGS YDQADLVVSA SAPVSDLLRV GVAGARLSRG GFGDNLTNGL ENYNKDVWAG
RGTVELGGYG EPVLIRISGD YTKDKSAPRG GHRLIPSLAT GAPVLDNVFD TRGGLNDPKQ
EIEAYGLAMN VSAELSDTVT LRSISAWRKD KSATPIDFDA LPAVDVDVPG FYFNEQISQE
LQLLYEGDRL KGLLGFYYLD ATADTLFDVR IFNTFAGLTA FTEADVDTTT FAVFGDFTYD
FSDQFSLSVG GRYTWDKRTA SILRQNYLGG GSPVFGGAGV PFGAPSTNFD GSRKFNKFTP
RVSLQYQPTS DHNFYASYSQ GFKGGGFDPR GVGVNAPAAI PGSPTDAEVA SFLSFLPEQV
DSYEVGYKGS LMDGAVNVAL AAFYADYSDV QIPGSVACTV GGLPTFCGVV SNAGKATFKG
LEFEGRARLA EDMAAAGDRL TLSTALGYID AQYKEYVTNI GGVPTDVADF REVQNTPKWT
ASGTLAYSTP VGDGEIRFGT TLSYRSKTHQ FEIPNPYIDQ KGFALWDASL VYTAPDDRWS
LGLFGKNLTN KKYKTSGYTF IVVDPVTGVP ALGANGLPRS ALGTEGTLTA FYGNPRQVFV
TGTVKF
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