| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2880 |
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| Symbol | |
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| ID | 4080673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3031268 |
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| End bp | 3032395 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011264 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_617918 |
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| Protein GI | 103488357 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGATC CGAAACCGCT GGAGGGCATC CGCGTCGTCG AGCTGGCGCG GGTGCTCGCG
GGCCCGTGGT GCGGGCAATT GCTCGCCGAT CTGGGAGCCG AGGTGGTCAA GGTCGAACGG
CCGGGCGCGG GCGACGACAC GCGCGAATGG GGGCCGCCCT TCGTCACCGG CGACGATGGC
GAGCATCTCG GCGCCGCCTA TTACCACAGC TGCAACCGCG GCAAGCGCAG CGTCGCCGTC
GATATTGCGA GCGCCGAAGG GCAGGCCGAG GCGCGCGCGC TGCTCGCCGA TGCCGATGTC
GTCATCGAAA ATTACAAGGT CGGCGGGCTC GCCAAATATG GCCTCGACCC CGCGGCGCTG
CGCGCCGATT TTCCGCGGCT GATCGTCTGC TCGATCACCG GCTTCGGACA GACCGGCCCC
TATGCGCACC GTGCGGGCTA TGACTATATC ATCCAGGCGA TGAGCGGCTT CATGTCGCTG
ACCGGCGAGC CCGACGGGCC GCCGCAAAAG GCGGGGATCG CCTATGCCGA CATTTTCACC
GGTCTCTATT CGGCTGTGGC GGTGCTCGCG GCGTTAAGGC GGCGTGACGT CACGGGATCG
GGCGCGCATA TCGACATGGC GCTGCTCGAT TCGCAGGTGG CGGTGCTCGC CAATCAGGCG
GCCAATTTTC TCGCGAGCGG CGTCGCGCCG AAACGAATGG GCAATGCGCA TGCCAATGTC
GTTCCCTATC AGGTCTTTGC CACCGCCGAC GGTCAGCTGG TGATCGCGGT GGGCAACGAC
GCGCAATATC GCAGGCTCTG CGCGATTCTG GGCGTGCCCG AATGGGGCGC GGATTCGCGC
TTTGCCACCA ATGCCGCGCG GCTGGCGAAC CGCGACGAAC TGATCCCGCT GCTTGCGGCG
AAGATTGCGA CCTGGGAGGC GCAGCCGCTG TCGCTGGCGC TCGAGGCCGA GGGTGTGCCC
GCGGGGCCGA TCAACGACCT CGCGCAGCTG TTCGCCGACC CGCAGGTGAT CGCGCGCGGG
ATGCGTTTCC GCCCCGACGG CGCGGCGATC GACGGCGTGG CCAGTCCGAT CGTCATTGAC
GGCGAACGCA TGGTCGCGTC GGGCGGAGCG CCGCGGCTGG GTGACTGA
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| Protein sequence | MPDPKPLEGI RVVELARVLA GPWCGQLLAD LGAEVVKVER PGAGDDTREW GPPFVTGDDG
EHLGAAYYHS CNRGKRSVAV DIASAEGQAE ARALLADADV VIENYKVGGL AKYGLDPAAL
RADFPRLIVC SITGFGQTGP YAHRAGYDYI IQAMSGFMSL TGEPDGPPQK AGIAYADIFT
GLYSAVAVLA ALRRRDVTGS GAHIDMALLD SQVAVLANQA ANFLASGVAP KRMGNAHANV
VPYQVFATAD GQLVIAVGND AQYRRLCAIL GVPEWGADSR FATNAARLAN RDELIPLLAA
KIATWEAQPL SLALEAEGVP AGPINDLAQL FADPQVIARG MRFRPDGAAI DGVASPIVID
GERMVASGGA PRLGD
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