| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2875 |
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| Symbol | |
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| ID | 4080668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3026366 |
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| End bp | 3027400 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638011259 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_617913 |
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| Protein GI | 103488352 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.640549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA TCCTCGGCCT CGAATCGAGC TGCGACGAAA CGGCAGCGGC GCTTGTCACC
GGCGACCGGC GCGTCCTCGC GCACCGCGTT GCGGGACAGG AGGCCGAACA CCGGCCCTAT
GGCGGCGTGG TACCCGAAAT CGCCGCGCGC GCGCATGTCG ACCGGCTCGC GCCGATCGTC
GAAGGCGTGC TCGATGACGC GGGCGTGACG CTCGCCGACG TCGATGCGAT CGCAGCGACC
GCCGGGCCGG GGCTGATCGG CGGGGTGATG GTCGGCCTCG TCACCGGCAA GGCGCTGGCG
CACGCCGCGA ACAAGCCGCT GATCGCGGTC AACCATCTCG AGGGCCATGC GCTCAGCCCG
CGGCTCGCCG ATCCGACCCT CGACTTTCCC TATCTGCTGC TGCTCGTCTC GGGCGGGCAT
TGCCAGTTGC TGCTCGTAAA GGGCGTCGGC GATTATCGCC GTCTCGCCAC CACGATCGAC
GATGCCGCGG GCGAGGCGTT CGACAAGACC GCCAAGCTGC TCGGCCTCGG CTATCCGGGT
GGTCCCGCGG TCGAACGCAT CGCGGCCGAA GGCGACCCGC ACGCCGTGCC GCTGCCGCGC
CCGCTCGTCG GCAGCGCCGA GCCGCATTTC TCCTTTGCCG GGCTGAAAAG CGCGGTCGCG
CGCGCCGCGG CGAGCGGAAC CCATGACGTT GCCGATCTCG CTGCCTCGTT CCAGCAGGCC
GTCGTCGACT GCCTCGTCGA TCGCAGCCGC GGCGCGCTCG CGGCGTGCCC CGATGCCAGG
GCCTTCGTCG TCGCGGGCGG CGTCGCGGCC AATGGCGCGA TCCGCACCGC GCTCACCGAC
CTCGCCGCGC GCTTCGACAA GCCCTTCGTC GCGCCGCCGC TGTGGCTCTG CACCGACAAT
GGCGCGATGA TCGCCTGGGC GGGCGCCGAA CGCTTTGCCG CGGGGCTGAC CGACCCGCTC
GATACTGCGG CGCGCCCGCG CTGGCCGCTC GACCCCGCAG CCGAAGCAGT GCGCGGCGCG
GGAGTGAAAG CATGA
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| Protein sequence | MTLILGLESS CDETAAALVT GDRRVLAHRV AGQEAEHRPY GGVVPEIAAR AHVDRLAPIV
EGVLDDAGVT LADVDAIAAT AGPGLIGGVM VGLVTGKALA HAANKPLIAV NHLEGHALSP
RLADPTLDFP YLLLLVSGGH CQLLLVKGVG DYRRLATTID DAAGEAFDKT AKLLGLGYPG
GPAVERIAAE GDPHAVPLPR PLVGSAEPHF SFAGLKSAVA RAAASGTHDV ADLAASFQQA
VVDCLVDRSR GALAACPDAR AFVVAGGVAA NGAIRTALTD LAARFDKPFV APPLWLCTDN
GAMIAWAGAE RFAAGLTDPL DTAARPRWPL DPAAEAVRGA GVKA
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