| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2874 |
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| Symbol | gpsA |
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| ID | 4080667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3025377 |
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| End bp | 3026369 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638011258 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_617912 |
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| Protein GI | 103488351 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.618443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGT ATCGCAATTT CGGCATTGTC GGCGGCGGAG CGTGGGGCAC CGCGCTGGCG
CAGCTCCTCG CCGCCGATGG CGCGCCGGTG CGCCTGTGGG CGCGCGAGGC CGATGTGGTC
GCCGCGATCA ATGCCGAGCA TCGCAATCCG GTCTTCCTTC CCGGCGCGCC GCTCTCCTCG
TCGCTCACCG CCACCACCGA TCTGGCGGCG ATGACCGATC TCGACGCGCT GCTGGTCGTC
GTCCCCGTGC CCTATCTGCG CGCCGTGCTC ACCGAACTGC CGCCGGGCGA CGCGCCGCTG
GTCTTTTGCA GCAAGGGGAT GGAGGCGGGC AGTTTCGCCT TCCCGGTCGA CATGGCGCGC
GACCTGGCGC CCGGTCGCCC GCACGCGGTG CTGTCGGGCC CGACCTTTGC GCATGAAGTC
GCCGCCGGCC TGCCGACCGC GATCACGCTC GCCGCCGCCG ACCCCGCGCT CGCCACCGAG
CTTGCGCAGG CGCTCGCGCG CCCGCATTTC CGCCCCTATG TGTCGACCGA CGTGATCGGC
GCCGAAATCG GCGGGGCGGT CAAGAACATC CTCGCGATCG CGTGCGGCAT CGTCGAAGGG
GCGGGACTCG GGCTCAACGC GCGCGCGGCG CTGATCAGCC GGGGCTTTGC CGAAATGACG
CGCTTCGGCC TGTCGCGCGG GGCAAAGGCC GAAACGCTCG CGGGTCTCGC CGGGCTCGGC
GACCTCGTGC TCACCTGCAC CTCCGCCAAT TCGCGCAATT TCGCGCTTGG TCAGGGACTG
GGACGCGGCG AGGCGATCGA GACGCTGATG GCCGACCGGC GCACGATCGC CGAGGGCGCA
TTCAGCGCCC CGGTCGTCGC CGCTGCGGCG CGTGCCGACG GGGTCGACAT GCCGATCACC
GACACCGTCG CGCGCCTCGT CGCGGGCGAG ATGCGCGTCG CCGACGCCAT TCAGGCCCTG
CTCAGCCGCC CGCTGCGACC CGAAGGGCAA TGA
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| Protein sequence | MTSYRNFGIV GGGAWGTALA QLLAADGAPV RLWAREADVV AAINAEHRNP VFLPGAPLSS
SLTATTDLAA MTDLDALLVV VPVPYLRAVL TELPPGDAPL VFCSKGMEAG SFAFPVDMAR
DLAPGRPHAV LSGPTFAHEV AAGLPTAITL AAADPALATE LAQALARPHF RPYVSTDVIG
AEIGGAVKNI LAIACGIVEG AGLGLNARAA LISRGFAEMT RFGLSRGAKA ETLAGLAGLG
DLVLTCTSAN SRNFALGQGL GRGEAIETLM ADRRTIAEGA FSAPVVAAAA RADGVDMPIT
DTVARLVAGE MRVADAIQAL LSRPLRPEGQ
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