Gene Sala_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2872 
Symbol 
ID4080665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3022677 
End bp3023675 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID638011256 
ProductPfkB 
Protein accessionYP_617910 
Protein GI103488349 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.626247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA CCGCCCGTTT CGATGTCGTC GCGATCGGCA ATGCAATCGT CGATGTCCTT 
GCCCGCGCCG ACGATGCGCT GATCGAGGCC GAGGGGCTGA CCAAGGGGTC GATGCGGCTG
ATCGATGGCG CCGAGGCCGA GCGCCTCTAT GCCGCAATGG GCCCGGCGAT CGAAATGTCG
GGCGGGTCGG CGGCGAACAC GCTCGCGGGC ATGGCGGCGC TCGGCGAACG CTGTGCCTTC
ATCGGGCAGG TCGCCGACGA CCAGCTCGGC GCGGTATTCA CCCACGATCT GCGCGCGCTC
GGCGTCGCCT ATGAAACCCC GGCGCTCAAG GACGGCGCGC CGACCGCGCG CTGCCTGATC
CTTGTCACCC CCGACGGGCA GCGGACGATG AACACCTTTC TGGGTGCGAG CCATTTGCTC
GATCGGGTGA TGATCGACGA GGCGTGGATC GCCGACGCCG AAATCCTCTA TCTCGAAGGC
TATCTCTGGG ATCCGCCGCT GTCGCGCGCG GCGATGCGGC GCGCGATCGA CGTCGCGCGC
GCAGCAGGGC GCAAGGTCGC CTTCACCCTC TCGGACGCCT TCATCATCGA GCGCCACGGG
CCCGATTTCC GCGCGCTGAT CGCCGAGGGG CTGTTCGACA TCCTCTTTGC GAACGAGGTC
GAAATCCGCG CGCTCGCCGA AACGCAGGAT TTCGAGGCGG CGGTCGCCAG GATCGCGCCG
CAGGTGCCTT TGCTCGTCGT CACGCGCGGC TCGCACGGCG CGCTGGCGAT CCAGGGCGGC
GTCCGCACCG AAGTCCCCGC CGAACCCATT GAAACGGTCG TCGATACCAC GGGCGCGGGC
GACCTGTTTG CTGCCGGATT TCTGTCGGGC CTCGCCGAGG GGCGCCCGAT CGCCGATTGC
CTGACGATGG GTGCGGTGTG CGCGCGCGAG ATCATCGCGC AGGTCGGGCC GCGTGCGCAG
ACCGACCTCA AGGCGAAGGT CGCTGCGCGA CTGGGATAG
 
Protein sequence
MAATARFDVV AIGNAIVDVL ARADDALIEA EGLTKGSMRL IDGAEAERLY AAMGPAIEMS 
GGSAANTLAG MAALGERCAF IGQVADDQLG AVFTHDLRAL GVAYETPALK DGAPTARCLI
LVTPDGQRTM NTFLGASHLL DRVMIDEAWI ADAEILYLEG YLWDPPLSRA AMRRAIDVAR
AAGRKVAFTL SDAFIIERHG PDFRALIAEG LFDILFANEV EIRALAETQD FEAAVARIAP
QVPLLVVTRG SHGALAIQGG VRTEVPAEPI ETVVDTTGAG DLFAAGFLSG LAEGRPIADC
LTMGAVCARE IIAQVGPRAQ TDLKAKVAAR LG