Gene Sala_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2864 
Symbol 
ID4080657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3016042 
End bp3016527 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID638011248 
Productprotein-methionine-S-oxide reductase 
Protein accessionYP_617902 
Protein GI103488341 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.578028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGC GACGTTATCT TCTGGGCGGT CTGGCGCTCG GCGGCAGCAT CATCGCCGCG 
CCGATGCTGT TCGCCAAATC GGCGCGGCCC GGGGCGGAGC CGGGCTGGCG CCTGTCCGAA
GCCGAGTGGA AAAAGCGCCT GTCGCCGCTG GAATATCGCG TGCTGCGCGA GGCGGCGACC
GAGCGCCCCT TCACCAGCCC GCTCGACAAG GAAAAGCGGG CCGGAACATT CGTCTGCGCG
GGCTGCGCGC TGCCGCTTTA TTCGAGCAGG ACCAAATATG ACAGCGGCAC CGGCTGGCCG
AGTTTCTGGG CGCCGCTGAA GGGCGCGATC GGCACCGCGA CCGACCATGA CCTCGGTTAT
CCGCGCACCG AGGTGCATTG CCGGCGCTGC GGCGGTCATC TGGGCCATGT CTTCAACGAC
GGCCCGAAAC CGACCGGCAA GCGTTATTGC ATGAACGGCG CGGCGCTGCG CTTCCGCCCC
GCCTGA
 
Protein sequence
MIPRRYLLGG LALGGSIIAA PMLFAKSARP GAEPGWRLSE AEWKKRLSPL EYRVLREAAT 
ERPFTSPLDK EKRAGTFVCA GCALPLYSSR TKYDSGTGWP SFWAPLKGAI GTATDHDLGY
PRTEVHCRRC GGHLGHVFND GPKPTGKRYC MNGAALRFRP A