Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2864 |
Symbol | |
ID | 4080657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3016042 |
End bp | 3016527 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638011248 |
Product | protein-methionine-S-oxide reductase |
Protein accession | YP_617902 |
Protein GI | 103488341 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.578028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCGC GACGTTATCT TCTGGGCGGT CTGGCGCTCG GCGGCAGCAT CATCGCCGCG CCGATGCTGT TCGCCAAATC GGCGCGGCCC GGGGCGGAGC CGGGCTGGCG CCTGTCCGAA GCCGAGTGGA AAAAGCGCCT GTCGCCGCTG GAATATCGCG TGCTGCGCGA GGCGGCGACC GAGCGCCCCT TCACCAGCCC GCTCGACAAG GAAAAGCGGG CCGGAACATT CGTCTGCGCG GGCTGCGCGC TGCCGCTTTA TTCGAGCAGG ACCAAATATG ACAGCGGCAC CGGCTGGCCG AGTTTCTGGG CGCCGCTGAA GGGCGCGATC GGCACCGCGA CCGACCATGA CCTCGGTTAT CCGCGCACCG AGGTGCATTG CCGGCGCTGC GGCGGTCATC TGGGCCATGT CTTCAACGAC GGCCCGAAAC CGACCGGCAA GCGTTATTGC ATGAACGGCG CGGCGCTGCG CTTCCGCCCC GCCTGA
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Protein sequence | MIPRRYLLGG LALGGSIIAA PMLFAKSARP GAEPGWRLSE AEWKKRLSPL EYRVLREAAT ERPFTSPLDK EKRAGTFVCA GCALPLYSSR TKYDSGTGWP SFWAPLKGAI GTATDHDLGY PRTEVHCRRC GGHLGHVFND GPKPTGKRYC MNGAALRFRP A
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