Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2861 |
Symbol | |
ID | 4080654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3012207 |
End bp | 3013742 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638011245 |
Product | hypothetical protein |
Protein accession | YP_617899 |
Protein GI | 103488338 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.245537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG CCCTTGGTTC ACAAAACCAC CCGACGAAGG TTGACGTGGC GATCATCGGC GCGGGACCGG CCGGCCTCAC CGCCGCCTAT CTGCTGACCA GGCAGGGCTA TGGCGTGACG GTGATCGAAA AGGATCCGAC CTATGTCGGC GGGATCAGCC GCACGGTCGA ACATGAGGGC TTTCGTTTCG ACATCGGCGG GCACCGCTTT TTCTCCAAAA GCCGCGAAGT CGTCGATCTG TGGAACGAGA TTCTGCCCGA CGACTTCATC GAGCGCCCGC GGATGAGCCG CATCTATTAT GAGGGCAGGT TTTACAGTTA TCCGCTGCGC GCGTTCGAGG CGCTGTGGAA CCTCGGCGTC GTGCGGTCGA CCTTGTGCAT GATGAGCTAC GCCAGGGCGA AGCTGCTGCC GAAGAAGACG GTGCGCAGTT TCGAGGACTG GACGATCAAC CAGTTCGGGA ACAAGCTTTA TTCGATCTTT TTCAAGACCT ATACCGAAAA GGTGTGGGGA ATGCCGTGTG ACGAAATGTC GGCCGACTGG GCGGCGCAGC GCATCAAGGG GCTTTCGCTC GGCGGCGCAG TGATCGACGG GCTGAAACGC AGCCTGGGGC TCAACAAGAA GCCCAATGAC GGCATGGCGA CCAAGACCTT GCTCGAAACC TTCCGTTATC CGCGGCTCGG GCCGGGCATG ATGTGGGAGG CGGCGGCGCG CAAGGTCGTG GCGGGCGGCA ATCATCTGCT GATGGGCCAC AGCTTCAAGC AGCTGACGCA GGACCAGAAA ACCGGGCGCT GGCGGATGAC CGCGACCGGG CCCGACGGCG ATGTCGTGAT CGACGCGGGC CATGTCATCA GCTCGGCGCC GATGCGCGAA CTGGCGGCGC GCATCCATCC GCTCCCGGCC TGCGCGCTGA CCGCGGCGCC CAAGCTCAAT TACCGCGACT TCCTGACCGT CGCGCTCAAG ATTCGGTCGG AGGATCTGTT CCCCGACAAC TGGATCTATA TCCACGACAG CCAGGTGCGG GTCGGCCGGG TGCAGAACTT CCGCAGCTGG TCGCCCGAAA TGGTCCCCGA TCCGGCGATC GCCTGCGTCG GCCTCGAGTA TTTCTGTTTC GAGGGCGACG GACTCTGGTC GTCGAGCGAC GCCGATCTCA TCGCCCTGGC GACGAAGGAA ATGGCGATCC TTGGCCTGTG CAAGGCCGAG GATGTCGTCG GCGGCGCGGT GGTGCGGCAG GAAAAGGCCT ATCCCGTCTA TGACGATGAC TATGCCGCGC ATGTCGAGAC GATGCGGTCC GAGCTGGAGG CGCGGTATCC GACGCTGCAC ATGGTCGGGC GGAACGGCAT GCACCGCTAT AACAACCAGG ATCATGCGAT GATGACGGCG ATGCTGACCG TGCGCAACAT CGTCGCCGGC GAGAAGCTTT ACGACATCTG GGGCGTCAAC GAGGACGCCG AATATCATGA AAGCGGCACC GAGGGTGAAC GCGCCGCGCT GGCGTCGGTG CGCGACGTCC CGGCGCGCGT CGCCAGGGCC GCCTGA
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Protein sequence | MSEALGSQNH PTKVDVAIIG AGPAGLTAAY LLTRQGYGVT VIEKDPTYVG GISRTVEHEG FRFDIGGHRF FSKSREVVDL WNEILPDDFI ERPRMSRIYY EGRFYSYPLR AFEALWNLGV VRSTLCMMSY ARAKLLPKKT VRSFEDWTIN QFGNKLYSIF FKTYTEKVWG MPCDEMSADW AAQRIKGLSL GGAVIDGLKR SLGLNKKPND GMATKTLLET FRYPRLGPGM MWEAAARKVV AGGNHLLMGH SFKQLTQDQK TGRWRMTATG PDGDVVIDAG HVISSAPMRE LAARIHPLPA CALTAAPKLN YRDFLTVALK IRSEDLFPDN WIYIHDSQVR VGRVQNFRSW SPEMVPDPAI ACVGLEYFCF EGDGLWSSSD ADLIALATKE MAILGLCKAE DVVGGAVVRQ EKAYPVYDDD YAAHVETMRS ELEARYPTLH MVGRNGMHRY NNQDHAMMTA MLTVRNIVAG EKLYDIWGVN EDAEYHESGT EGERAALASV RDVPARVARA A
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