Gene Sala_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2851 
Symbol 
ID4080644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3000580 
End bp3001278 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID638011235 
Productcarboxymethylenebutenolidase 
Protein accessionYP_617889 
Protein GI103488328 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGA CGAATATGAC CATCCCCGCG CTCGACGGGA CGAACCGGAT TCCCGCCTAT 
GTCGCGCGCC CCGACGCCGA CAGCTCGCGT GCGATCATCG TCATCCCCGA AATCTTCGGG
GTGAACGCGG GCATCCGCCA GAAATGCGAC GATTGGGCGG CCGAGGGCTA TCTGGCGATC
GCCCCCGACA TTTTCTGGCG TTTCGCCCCC GGCGTTGAGC TCGATCCCGA CATCGAGGCC
GAACTCAACG AGGCTTTCGG CTATTTTGGT CAATATGACG CCGACGACGG GGTGAAGGAC
ATCGAAGCGG CGATCCGCTG GCTCCACAGC CAGGGGGCGA GCAAGGTCGG CTGCGTCGGC
TTCTGCCTCG GCGGCCGCCT CGCCTATATG GCGGCAGCAC GCACCGACGT CGATGCGTCG
GTGGGCTATT ATGGGGTGAT GATCGACCAG ATGCTCAACG AAAGCCATGC GATCGCCAAT
CCGCTGATGC TCCATATCCC GACCGCGGAC CATCTGGTCG ACCATGACGC GCAAAAACGG
ATTCACGACG CCCTCGATCC GCATCCGAAG GTGACGCTCC ACGATTATCC GGGCCTCGAC
CATGGTTTCG CCGCGACGAT GGGCAATCGC CGCAACGACG AAGGCGCGAG GCTCGCCGAC
GCTCGCACCC GCGCCTTTTT CGCCGAGCAT CTGGCATGA
 
Protein sequence
MPATNMTIPA LDGTNRIPAY VARPDADSSR AIIVIPEIFG VNAGIRQKCD DWAAEGYLAI 
APDIFWRFAP GVELDPDIEA ELNEAFGYFG QYDADDGVKD IEAAIRWLHS QGASKVGCVG
FCLGGRLAYM AAARTDVDAS VGYYGVMIDQ MLNESHAIAN PLMLHIPTAD HLVDHDAQKR
IHDALDPHPK VTLHDYPGLD HGFAATMGNR RNDEGARLAD ARTRAFFAEH LA