Gene Sala_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2846 
Symbol 
ID4080639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2998233 
End bp2998955 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID638011230 
Productintegral membrane protein TerC 
Protein accessionYP_617884 
Protein GI103488323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0648136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATA TTTTGATGCA GGCCGGCGTG CACGCCGGCG GATTTGGCGG ACCCGCGGGC 
ATGTGGGACG CGATCGTCCA CGATTTTTCG AACATCACCG AACCCGCGGC CTTCGCCGCC
TTCCTGCAGG TGTTGATGAT CGACATCGTG CTCGCGGGCG ACAATGCGAT CGTCGTCGGC
GCGCTCGCGG CGGGACTTCC CGCCGACCAG CGGCGCAAGG TTATCATCAT CGGTGTGCTA
GCAGCGCTCG TGCTGCGCGT CGCCTTTGCT CTCGTCGTGA CGCAGCTGAT GCAGATCGTC
GGGCTGATCT TCGTCGGCGG GCTGCTGCTT ATCTGGGTGG CGTGGAAGAT GTGGCGCGAA
CTGCGCGACG GCGCGCATTC GGCGGGGTCG CCCGAAGTCG TCGGCGACGA ACATTCGGGC
CTCAAGCCCG CCAAGAGCTT TGCCGGTGCC GCCTGGGCGG TTGCCGTCGC CGACGTCAGC
ATGAGCCTCG ACAATGTGCT GGCGGTCGCG GGCGCGGCGC GCGATCACCC CGGCATCCTG
ATCGTCGGCC TGATCTTCGC GGTCGCATTG ATGGGTATCG CAGCCAACAT CATCGCCAAA
TATATCGAGC GCTATCGCTG GATCGCCTAT CTCGGCCTCG CAGTGATCGT CTATGTCGCG
ATCAAGATGA TCTACGAAGG CTGGATCGAC CCCGGCGTCG GCATCGGCAC GCTTTTCGGC
TGA
 
Protein sequence
MLDILMQAGV HAGGFGGPAG MWDAIVHDFS NITEPAAFAA FLQVLMIDIV LAGDNAIVVG 
ALAAGLPADQ RRKVIIIGVL AALVLRVAFA LVVTQLMQIV GLIFVGGLLL IWVAWKMWRE
LRDGAHSAGS PEVVGDEHSG LKPAKSFAGA AWAVAVADVS MSLDNVLAVA GAARDHPGIL
IVGLIFAVAL MGIAANIIAK YIERYRWIAY LGLAVIVYVA IKMIYEGWID PGVGIGTLFG