| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2845 |
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| Symbol | rho |
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| ID | 4080638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2996954 |
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| End bp | 2998210 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638011229 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_617883 |
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| Protein GI | 103488322 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.495163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0341841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTGA AAGAACTCAA AACAAAATCG CCCGCGCAGC TCGTCGAAAT GGCCGAGGAA
CTGGGCGTCG AGGGCGCATC GACGATGCGC AAGCAGGATC TGATGTTCTC GATCCTGAAG
GAGCTCGCCG AAGAGGGCGA GGAAATCATC GGGTCGGGGA CGATCGAGGT ACTGCCCGAC
AGCTTCGGGT TCCTGCGCTC GTCCGAGGCC AATTATCTCG CCGGTCCCGA CGACATCTAT
GTCTCGCCGA ACCAGGTCCG CAAATATGGC CTGCGTACCG GCGACACCGT CGAGGGCGAG
ATTCGTGCGC CGCGCGATGG CGAACGCTAT TTCGCGCTCA CCAAGCTGAT CAGCGTCAAT
TTCGACGATC CCGACGTCGT GCGCCACCGC GTCAATTTCG ATAACCTCAC ACCGCTCTAT
CCGAACCAGA AGCTGTCGCT CGACACCGTC GATCCGACGG TCAAGGACAA GTCGGCGCGC
GTCATCGACC TTGTCAGCCC GCAGGGCAAG GGGCAGCGCG CGCTGATCGT CGCGCCGCCG
CGCACCGGCA AGACGGTGCT CTTGCAGAAT ATCGCCAAGG CGATCACCGA CAACCACCCG
GAAGTTTACC TCATCGTCCT CCTCGTCGAC GAACGGCCCG AGGAAGTCAC CGATATGCAG
CGCAGCGTGA AGGGCGAGGT CGTTTCCTCC ACCTTCGACG AACCCGCGAC GCGCCACGTC
CAGGTCGCCG AAATGGTGAT CGAAAAGGCC AAGCGTCTCG TCGAGCACAA GAAGGATGTC
GTCATCCTGC TCGATTCGAT CACGCGCCTC GGTCGTGCCT ACAACACCGT CGTCCCTTCG
TCGGGCAAGG TGCTGACCGG CGGCGTCGAC GCCAATGCGC TGCAGCGGCC GAAGCGTTTC
TTCGGCGCCG CGCGCAACAT CGAAGAGGGC GGTTCGCTGT CGATCATCGC CACGGCGCTG
ATCGATACCG GCAGCCGCAT GGACGAGGTC ATCTTCGAAG AGTTCAAGGG CACGGGTAAC
AGCGAAATCG TGCTCGACCG CAAGGTTGCC GACAAGCGCA TCTTCCCGGC GCTCGACGTC
GGCAAGTCGG GCACGCGCAA GGAAGAATTG CTCGTTGAAA AGGACAAGCT CTCGAAAATG
TGGGTGCTGC GCCGCATCCT CATGCAGATG GGCACCGTCG ACGCAATGGA GTTCCTGCTC
GACAAGATCA AGGATTCGAA GACAAACGAG GATTTCTTCG ATTCGATGAA CCAATAG
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| Protein sequence | MHLKELKTKS PAQLVEMAEE LGVEGASTMR KQDLMFSILK ELAEEGEEII GSGTIEVLPD
SFGFLRSSEA NYLAGPDDIY VSPNQVRKYG LRTGDTVEGE IRAPRDGERY FALTKLISVN
FDDPDVVRHR VNFDNLTPLY PNQKLSLDTV DPTVKDKSAR VIDLVSPQGK GQRALIVAPP
RTGKTVLLQN IAKAITDNHP EVYLIVLLVD ERPEEVTDMQ RSVKGEVVSS TFDEPATRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL GRAYNTVVPS SGKVLTGGVD ANALQRPKRF
FGAARNIEEG GSLSIIATAL IDTGSRMDEV IFEEFKGTGN SEIVLDRKVA DKRIFPALDV
GKSGTRKEEL LVEKDKLSKM WVLRRILMQM GTVDAMEFLL DKIKDSKTNE DFFDSMNQ
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