| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2843 |
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| Symbol | hemE |
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| ID | 4080636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2995278 |
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| End bp | 2996306 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638011227 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_617881 |
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| Protein GI | 103488320 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0629975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCGT CACCGAAGAA GCTGCTCGCG ACGTTGCGCG GAGCGCGGCA CGAGCGAACG
CCGCTCTGGC TGATGCGCCA GGCCGGGCGC TATCTTCCCG AATATCGCGC CCTTCGCGAG
AGCAAGGGCG GATTCCTCGA GCTGTGCTAC GATCCCGAAG CCGCCGCCGA AGTCACGTTG
CAGCCGATCC GCCGCTTCGG TTTCGACGGC GCGATCCTTT TCTCCGACAT TCTCGTCATC
CCGCACGCGC TCGGCCAGCA TCTGTGGTTC GAGGCGGGCG AAGGTCCGCG GCTTGCGCCG
CCGCTCGTCG ATGGCGCCTT GGCGTCACTC GAAGCCGCGC CGCAGCGCCT CGATCCCGTC
TATGCGACGG TCGCGCGCGT CGCAGCCTCG CTGCCGCCCG AAACGACCTT TCTCGGCTTT
GCGGGCAGCC CGTGGACCGT CGCGACCTAT ATGGTCGCGG GACGGGGATC GAAGGATCAG
GCGGCGGCGC GGCGGATGGC CTTCGCCGAC CCGGCCGCGT TCGGCGCCAT CATCGATGCG
ATTGCCGATC TGACCGTGAC CTATTTGTCG GGCCAGATCG AACAGGGCGT CGACGCGGTG
CAGCTTTTCG ACAGCTGGGC GGGCAGCCTC AGCCCCGCGC AGTTCGAACA ATGGGTGATC
GCCCCCAATG CCGGAATCGT CCGCCGTCTG AAGGCGCTGC ACCCTGACAC GCCGGTGATC
GGCTTTCCGA AGGGCGCGGG GGGCAAGCTT CGTGCCTATG CCGAAGAAAC CGGCGTCGAT
GCGATCGGCC TCGACGAAAC GGTCGATCCG ACATGGGCCG ATGCCGCCTT GCCGTCACAG
CTGCCCGTCC AGGGCAATCT CGACCCGCTC GCGCTCGTTG CGGGTGGTGC GGCGCTCGAT
GCCGCGATCG ACCGCATCCT TGCGGCTTTT CCGTCGCGCC CCCATATCTT CAATCTGGGC
CACGGGATCG TTCCCGACAC CCCGGTTGCC CATGTCGAAC ATCTCATCAA GCGCGTTCGC
GGCGGATAA
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| Protein sequence | MKASPKKLLA TLRGARHERT PLWLMRQAGR YLPEYRALRE SKGGFLELCY DPEAAAEVTL
QPIRRFGFDG AILFSDILVI PHALGQHLWF EAGEGPRLAP PLVDGALASL EAAPQRLDPV
YATVARVAAS LPPETTFLGF AGSPWTVATY MVAGRGSKDQ AAARRMAFAD PAAFGAIIDA
IADLTVTYLS GQIEQGVDAV QLFDSWAGSL SPAQFEQWVI APNAGIVRRL KALHPDTPVI
GFPKGAGGKL RAYAEETGVD AIGLDETVDP TWADAALPSQ LPVQGNLDPL ALVAGGAALD
AAIDRILAAF PSRPHIFNLG HGIVPDTPVA HVEHLIKRVR GG
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