| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2840 |
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| Symbol | |
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| ID | 4080633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2992714 |
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| End bp | 2993538 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011224 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_617878 |
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| Protein GI | 103488317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0530402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC CCTATGCCTC CCCCTTCGCC GAGGTGATCG GAGATCCGAT CGCCCAGTCG
AAATCGCCGC TGATCCACGG GTTCTGGCTC GACGCGTTGG GTATGGAGGG CGATTACCGC
CGCGCGCATG TAAAGGCCGA CGCGCTTGCC GCCTATATCG CCGAGCGACG GGCCGACCCC
GGCTGGCGCG GGTGCAACGT CACCATGCCG CACAAGGCGG CAGTCATGGA CCTCGTCGAT
GATCCGGGCG ATATTCGCGG CACGATCGGC GCGATGAACA CGATCGTTCG CCAGCCCGAT
GGATCGCTGA TCGGCACCAA TACCGATGCT GCGGGTTTCT ATTCGCCGCT CGCGGAGCTG
GATCTTGAGG GCGCGCCGAT CGCTGTCGTC GGTGCCGGCG GCGCCGCGCG CGCGGTGTTG
TTCGCGCTGG CGCGGGCGAA GGTCGGCAAG GTGGCGATCC TCAATCGCAG TCCGCTGAAG
GCCATGGGAC TGCTCGCCAC CTTTGGCCTC AAGGGCGATG TCGTCGCGCT CGATGCCGCA
CTGCCGCCGG TGCGACTGCT GGTCAATGCA AGCAGTCTCG GCATGGCGGG CCAGCCGCCG
CTCGACCTCG ACCTGTCGCC GCTGCCGGAC GATGCGATCG TCTATGACCT GGTCTATTCG
CCGCTCCGGA CCGGGCTCCT CAAGGCCGCC GAGGCGCGCG GGCTCGACAC GGTCGACGGG
CTCGACATGC TGATCGGGCA GGCGGCGCTG GCCTTCGAAC TCTTCTTCGG CGCGCCGCCG
CCCGAGGGGC GCGACGACGA ACTGCGCGCG CTGCTGGTGG CATGA
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| Protein sequence | MSHPYASPFA EVIGDPIAQS KSPLIHGFWL DALGMEGDYR RAHVKADALA AYIAERRADP
GWRGCNVTMP HKAAVMDLVD DPGDIRGTIG AMNTIVRQPD GSLIGTNTDA AGFYSPLAEL
DLEGAPIAVV GAGGAARAVL FALARAKVGK VAILNRSPLK AMGLLATFGL KGDVVALDAA
LPPVRLLVNA SSLGMAGQPP LDLDLSPLPD DAIVYDLVYS PLRTGLLKAA EARGLDTVDG
LDMLIGQAAL AFELFFGAPP PEGRDDELRA LLVA
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