| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2830 |
|---|
| Symbol | |
|---|
| ID | 4080411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2986033 |
|---|
| End bp | 2986491 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638011214 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_617868 |
|---|
| Protein GI | 103488307 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0456781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAACA GCTTTGACTG GACCCCCTAC CGCCGGTCGA CCGTCGGCTT CGACCGATTG
TTCGATTTCC TCGAAACCGG CGCTTCGAGC GCGGAAAATT ACCCGCCGTT CGACATCGAG
AAGATCGCCG AAGACCATTT CCGCATCACC GTCGCCGTCG CCGGATTCAA GTCCGACGAA
ATCGACATCA CCGCGCAGCA GAATATGCTG ACCGTCAGCG GTCGCAAAGC ACCGGTTGCG
GAGGGCGAGG AACGCAAGCT GCTCTATAGC GGCATCGCGA CGCGCGCGTT CGAGCGCCGC
TTTCAGCTCG CCGACTTCGT GCGCGTCGAA CGCGCCGACC TTGCCGACGG GCTGCTGACG
ATCGACCTGG TGCGCGAAGT GCCCGAGGCG ATGAAGCCGC ACAAGATCGC CATCGGCAGC
AGCGCGGCAC CGGTGATCGA GGACAAGAAG GCCGCGTAA
|
|---|
| Protein sequence | MRNSFDWTPY RRSTVGFDRL FDFLETGASS AENYPPFDIE KIAEDHFRIT VAVAGFKSDE
IDITAQQNML TVSGRKAPVA EGEERKLLYS GIATRAFERR FQLADFVRVE RADLADGLLT
IDLVREVPEA MKPHKIAIGS SAAPVIEDKK AA
|
|---|
| |