Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2825 |
Symbol | |
ID | 4080406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2979464 |
End bp | 2980765 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638011209 |
Product | amidohydrolase |
Protein accession | YP_617863 |
Protein GI | 103488302 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.886429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.061566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCTT TCCATCGCTT GTCGCTCGCG CTGGTCGGCG CGGCGCTCGC CACGCCGCTG GCCGCCCAGA CGCCTGCGCG CACGGTGATC CACGCCGGGC ATCTGCTCGC CGAACCCGGC AAGCCCGCGC GCGGCGCGGC GACGATCATT GTCGAGGGGG GCAAGATCGT CAGCATCGCC GACGGCCACC AACCTGCCGA GGCGGGCGCG ACGCTGATCG ACCTCAGCGA CAAATATGTC CTGCCGGGCC TGATCGACAG CCATGTCCAT CTGACGAGCG ACGCGGGCGG CCTCGCGGGC CAGCTGGAGG AAGTGACGCT CAGCCCCGCC GCGCAGGCCT TCAACGCCGA GGTGAACGGG ATGAAGACGC TGCGCGCGGG CTTCACGACG GTGCGCAACC TCGGCGACGG CGACGGTGCG ACGCTGGCGC TCCGCGACGC GATCCTTGCG GGCAAGGTGC AGGGGCCGCG CATCGTCGAT GCCGGCGCCA GCATCTCGGG CAGCGCCGGG CATATGGACG GTTCCCTGGG CTATCGCGAC GAGCTGCGGC CCTTCTTCGC GGGGGCGGGC AATACCTGCA ACGGCGCCGA CGATTGCCGC CGCGCGGTGC GGCTCCAGAT CGGGCGCGGC GCCGACGTGA TCAAATTCGC GTCCACCGGC GGGGTCAACA GCCGGATCGG CGCGGGTCTC GGCAAGCAGA TGTTCGACGA CGAGGCGCAG GCGATCGTCG ATACCGCGCA TCTGTTCGGG AAAAAGGTCG CGGTCCACGC GCATGGCGCC GACGGCATCC GCCTCGCGCT CGCGGCGGGG GCCGATTCGA TCGAACATGG CACGATCCTC GACGAGGCGA CGATCGCCCA ATGGGCGAAA TCGAAAACCT ATTATGTTCC GACGCTCTCG ACCGTGAACG GGTACAAGGA ACGGCTCGCC GCCAATCCGG ACGCGTATGA ACCCGACGTG CTGGCGAAGA TCCGGTGGCG CATCTCGATC ACCGGCAAGA GCCTCGAGCA GCTCGTCCCG CGCGGGGTGA AGATCGCCTT CGGCACCGAC GCCGGCGTGT CGAAGCACGG CCGCAACGGC GACGAGTTCG AACTGATGGT CCAGCACGGC ATGACGCCTC TCGAGGCGCT GAAGGCGGCG ACGGTGAACG CCGCCGATCT GCTCGGCCTC GCCGACCAGA TCGGCAGCAT CGCGCCGGGC AAGAGCGCCG ACATTATCGC GGTGGCCAGC GATCCGCTCG CCGACGTCCG CGTGCTCAAA AAGGTCGATT TCGTCATGGC GCGGGGCAGG GTGGTCGACT GA
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Protein sequence | MKPFHRLSLA LVGAALATPL AAQTPARTVI HAGHLLAEPG KPARGAATII VEGGKIVSIA DGHQPAEAGA TLIDLSDKYV LPGLIDSHVH LTSDAGGLAG QLEEVTLSPA AQAFNAEVNG MKTLRAGFTT VRNLGDGDGA TLALRDAILA GKVQGPRIVD AGASISGSAG HMDGSLGYRD ELRPFFAGAG NTCNGADDCR RAVRLQIGRG ADVIKFASTG GVNSRIGAGL GKQMFDDEAQ AIVDTAHLFG KKVAVHAHGA DGIRLALAAG ADSIEHGTIL DEATIAQWAK SKTYYVPTLS TVNGYKERLA ANPDAYEPDV LAKIRWRISI TGKSLEQLVP RGVKIAFGTD AGVSKHGRNG DEFELMVQHG MTPLEALKAA TVNAADLLGL ADQIGSIAPG KSADIIAVAS DPLADVRVLK KVDFVMARGR VVD
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