| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2818 |
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| Symbol | rplC |
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| ID | 4080399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2972113 |
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| End bp | 2972886 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011202 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_617856 |
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| Protein GI | 103488295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.469348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACTG GCGTGATCGC GAAAAAAATG GGGATGACCC GCCTGTTTCA GGATGATGGC
CGCCATGTGC CCGTCACCGT CCTGAGCCTT GAAGGCTGTC AGGTCGTTTC CGTGCGCGAT
AAGGAACGCG ACGGCTATGT GGCCGTTCAA CTGGGTGCCG GCACGGCGAA GGCGAAGAAT
GTCGCCAAGC CGCAGCGCGG CGCCTATGGC AAGGCCGAGG TCGAACCCAA GGCGAAGCTC
GTCGAGTTCC GCGTCGCCGA CGACGCGACG CTCGACGTCG GCGCCGAACT GTCGGCCGAC
CATTTCGTCG CCGGCCAGAT GGTCGACATT CAGGGCGTGA CGCAGGGCAA GGGCTTTGCC
GGCGCGATGA AGCGCTGGGG CTTCGGCGGT ATGCGCGCCA CCCACGGCGT TTCGATCAGC
CACCGTGCGC ATGGTTCGAC GGGCAACCGC CAGGATCCGG GCCGCGTCTT CAAGAACAAG
AAGATGGCCG GTCACATGGG CGCGCGCAAC CGCACCCAGC AGAATCTCGA AATCGTCCGC
ACCGATGCCG AGCGCGGCCT TCTCTTCGTC AAGGGTTCGG TCCCCGGATC GAAGGGCGGC
TGGCTGCTCG TCCGCGATGC GGTGAAGCTG CCGCGCCACC CCGAGGCTCC CTATCCGGCG
AGCATCAAGA GCGCGGCCAA CACAAACACT GCCCCGGCTG ACGCGCCGGT CGAAACGCCG
GCCGAAGAGG CTGTCGTCGA CACCGCGGCG ACCGACGGCG CACAGGAGTC CTGA
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| Protein sequence | MRTGVIAKKM GMTRLFQDDG RHVPVTVLSL EGCQVVSVRD KERDGYVAVQ LGAGTAKAKN
VAKPQRGAYG KAEVEPKAKL VEFRVADDAT LDVGAELSAD HFVAGQMVDI QGVTQGKGFA
GAMKRWGFGG MRATHGVSIS HRAHGSTGNR QDPGRVFKNK KMAGHMGARN RTQQNLEIVR
TDAERGLLFV KGSVPGSKGG WLLVRDAVKL PRHPEAPYPA SIKSAANTNT APADAPVETP
AEEAVVDTAA TDGAQES
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