| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2817 |
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| Symbol | rplD |
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| ID | 4080398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2971484 |
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| End bp | 2972110 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638011201 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_617855 |
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| Protein GI | 103488294 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.477285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA AGGTTCAGAC CCTCGATGGC AAGGCTGGCG CCGACATCGA CCTTAACGAC
GACGTCTTCG GGCTCGATGC GCGTGCCGAC ATCCTGCACC GTGTCGTCGC CTGGCAGCTC
GAAAAGCGCC GCGGCCCGGC CCGCGCCGCC CGCGAGCGCA GCGACGTCGC CCGCACCGGC
AAGAAGTTCG GTCGCCAGAA GGGCGGCGGT ACGGCGCGTC ACGGCGACCG CCGGGCGCCG
ATCTTCATCG GCGGCGGCAA GGCGCACGGC CCGCGGGCCC GCACCTTCGG TCACTCGCTG
AACAAGAAGA TCCGCACCCT CGGCCTCAAG ATGGCGCTGA GCGACAAGGC GAAGGGCGGC
AAGCTCGTCG TCATCGACAC GCTCGAGCTC AAGGACGCGA AGACCAAGGC GCTCGCCGGC
AAGCTCGGCA AGCTCGACCT CGGCAAGCGC GCGCTGTTCA TCGACGGGGA CGCGGTTCAC
GAAAGCTTCG CGATGGCTTC GGCCAACCTG ATCGGTGTCG ATGCGCTGCC CGCGATCGGT
GCCAATGTCT ATGACATCGT CCGTGCCGAC ACGCTGGTCC TGACCCGCGC GGCGGTCGAA
AAGCTGGAGG CACGCTGCAA TGGCTAA
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| Protein sequence | MKIKVQTLDG KAGADIDLND DVFGLDARAD ILHRVVAWQL EKRRGPARAA RERSDVARTG
KKFGRQKGGG TARHGDRRAP IFIGGGKAHG PRARTFGHSL NKKIRTLGLK MALSDKAKGG
KLVVIDTLEL KDAKTKALAG KLGKLDLGKR ALFIDGDAVH ESFAMASANL IGVDALPAIG
ANVYDIVRAD TLVLTRAAVE KLEARCNG
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