Gene Sala_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2816 
SymbolrplW 
ID4080397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2971183 
End bp2971491 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content62% 
IMG OID638011200 
Product50S ribosomal protein L23 
Protein accessionYP_617854 
Protein GI103488293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.947427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.439693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG CAAAAACAGT CGACGCACGG CACTATGACG TGATCCTCGC TCCGGTGATC 
ACCGAAAAGT CGACGCTGCT CAGCGAAAAC AACGCCGTGG TGTTCAAGGT CGCGCGCGAC
GCGACCAAGC CCGCGATCAA GGCCGCCGTC GAGGCGCTGT TCGATGTCAA GGTGGTGGGC
GTGAACACGC TCGTCACCAA GGGCAAGACC AAGCGCTGGA AGGGCAAGCC CTACACCCGC
AGCGACGTGA AGAAGGCGAT CGTCCGCCTG GCCGAAGGCC AGTCGATCGA CGTCACCACC
GGCGTCTGA
 
Protein sequence
MAKAKTVDAR HYDVILAPVI TEKSTLLSEN NAVVFKVARD ATKPAIKAAV EALFDVKVVG 
VNTLVTKGKT KRWKGKPYTR SDVKKAIVRL AEGQSIDVTT GV