| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2812 |
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| Symbol | rpsC |
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| ID | 4080393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2968956 |
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| End bp | 2969663 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011196 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_617850 |
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| Protein GI | 103488289 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.102151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.475025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAGA AGAGCAATCC GATCGGCCTG CGCCTGCAGG TCAACCGCAC CTGGGACAGC
CGCTGGTTCG CCGAAGGCGA AGACTATGGC CGCATGTTGG TCGAGGATCT GAAGATCCGC
CAATATGTGT TCAAGGCCCT GCCGCAGGCG GCGATCTCGA AGGTCGTGAT CGAGCGTCCC
GCCAAGCTGT GCCGCGTGTC GATCTATGCC GCCCGTCCGG GCGTCATCAT CGGCAAGAAG
GGCGCCGACA TCGAAAAGCT GCGCAAGAAG CTGGGCGAGA TGACGGGCAG CGACGTGTCG
CTGAACATCG TCGAAATCCG CAAGCCCGAA GTTGACGCCA AGCTCGTCGC GCAGGGCATC
GCCGACCAGC TCGAACGCCG CGTCGCCTTC CGCCGCGCGA TGAAGCGCGC CGTCCAGTCG
GCGATGCGTC TCGGCGCCGA AGGCATCCGC ATCAACTGCG CCGGCCGTCT GGGCGGCGCG
GAAATCGCAC GCACCGAATG GTATCGCGAA GGCCGGGTGC CGCTGCACAC GCTGCGCGCC
AATGTCGATT ATGCCGAGGC CGAAGCGCAC ACCGCCTATG GCGTGTGCGG GATCAAGGTG
TGGATCTTCA AGGGCGAGAT ACTGGGTCAC GACCCGATGG CGACCGACCG TCTGATGCTC
GATGCGCAGA CGACGGGTGT CCGTCCGGCG CGTGAAGATC GCCGCTAA
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| Protein sequence | MGQKSNPIGL RLQVNRTWDS RWFAEGEDYG RMLVEDLKIR QYVFKALPQA AISKVVIERP
AKLCRVSIYA ARPGVIIGKK GADIEKLRKK LGEMTGSDVS LNIVEIRKPE VDAKLVAQGI
ADQLERRVAF RRAMKRAVQS AMRLGAEGIR INCAGRLGGA EIARTEWYRE GRVPLHTLRA
NVDYAEAEAH TAYGVCGIKV WIFKGEILGH DPMATDRLML DAQTTGVRPA REDRR
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