Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2811 |
Symbol | rplP |
ID | 4080392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2968513 |
End bp | 2968944 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638011195 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_617849 |
Protein GI | 103488288 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.647814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.456586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCAAC CGAAAAAAAC CAAGTTCCGC AAGGCTTTCA AGGGCCGCAT CCATGGCAAT GCCAAGGGCG GAACCAGCCT GAACTTCGGC TCCTATGGCC TGAAGGCGAT GGAACCCGAG CGCATCACCG CGCGCCAGAT CGAAGCGGCG CGCCGCGCGA TCAGCCGCGC GATCAAGCGC CAGGGCCGCC TGTGGATCCG TATCTTCCCC GACGTCCCCG TGTCGTCGAA GCCGGCCGAA GTCCGCATGG GCAAGGGCAA GGGTTCGCCC GAATACTGGG CCGCCCGCGT CAAGCCCGGT CGCATCCTGT TCGAACTCGA CGGCGTTCCC GGCCCCGTGG CCGCGCTGGC ATTCGAGCGT GCGGCGATGA AGCTGCCGAT CAAGACGAAG GTGATCGCCC GCCTCGGCGA CACCTCGCAC CTGGAGGGCT AA
|
Protein sequence | MLQPKKTKFR KAFKGRIHGN AKGGTSLNFG SYGLKAMEPE RITARQIEAA RRAISRAIKR QGRLWIRIFP DVPVSSKPAE VRMGKGKGSP EYWAARVKPG RILFELDGVP GPVAALAFER AAMKLPIKTK VIARLGDTSH LEG
|
| |