| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2801 |
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| Symbol | rpsE |
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| ID | 4080382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2964302 |
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| End bp | 2965030 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638011185 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_617839 |
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| Protein GI | 103488278 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.481619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGACG AAAACAGCAC CGGTCCGGGC AACCAGCCCG AAGCGACCCT GGCCCCCGAA
GCCACCAACG CCGAAGTCAC GAGCCAGGCA CCGCGTCGCG GTCGTGGCGG TGGCGGCCGC
GATGGCGGCC GTGGCGGGCG TGACGGTGGC CGTGGTCGCC GCGACGACCG TCGCCCGCGC
GATGAGGATG GCGGCGAAGA GCTGATCGAA AAGCTCGTCC ACATCAACCG CGTGTCGAAG
ACGGTGAAGG GCGGCAAGCG CTTCGGTTTC GCCGCGCTCG TCGTCGTCGG CGACGGCAAG
GGCCGCGCCG GTTTCGGCCA TGGCAAGGCG CGCGAAGTGC CCGAAGCCAT TTCGAAGGCG
ACCGCTGCCG CGAAGAAGGC GATGATCCGC GTTCCGCTGC GCGACGGCCG CACGCTGCAC
CATGACGGTC GCGGCCACTT CGGCGCCGGC AATGTGACGC TGCGTTCGGC GCCCGCCGGG
ACCGGCATCA TCGCCGGTGG CCCGATGCGC GCCGTGTTCG AATCGCTGGG CGTTGCCGAT
GTGGTGACCA AGTCGGTCGG CACCTCGAAC CCCTATAACA TGATCCGCGC GACCTTCGAG
GCGCTCGGCG AACAGACGAG CCCGAAGTCG GTCGCGCAGC GCCGCGGCAA GAAGGTTTCG
GACCTGATCA AGCGTGGCGG TGCGTCCGAC CGCGCAGCCG AGGCCGAAGC CGCGGCGGTG
ACGGAGTAA
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| Protein sequence | MADENSTGPG NQPEATLAPE ATNAEVTSQA PRRGRGGGGR DGGRGGRDGG RGRRDDRRPR
DEDGGEELIE KLVHINRVSK TVKGGKRFGF AALVVVGDGK GRAGFGHGKA REVPEAISKA
TAAAKKAMIR VPLRDGRTLH HDGRGHFGAG NVTLRSAPAG TGIIAGGPMR AVFESLGVAD
VVTKSVGTSN PYNMIRATFE ALGEQTSPKS VAQRRGKKVS DLIKRGGASD RAAEAEAAAV
TE
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