Gene Sala_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2800 
Symbol 
ID4080381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2964115 
End bp2964297 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content63% 
IMG OID638011184 
Productribosomal protein L30 
Protein accessionYP_617838 
Protein GI103488277 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.683701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA AGAAGATCAA GATCCGCCAG ATCGGTTCGC CGATCCGCCG TCCGAAGGAC 
CAGCGCAAGA TCCTGACCGG CCTCGGCCTG GGCAAGATGC ACCGCGAGGT CGAACTGGTC
GACACGCCGG AGGTGCGCGG CATGATCCGC AAGCTTCCGC ACATGGTCGA GGTGATCGAC
TAA
 
Protein sequence
MADKKIKIRQ IGSPIRRPKD QRKILTGLGL GKMHREVELV DTPEVRGMIR KLPHMVEVID