| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2799 |
|---|
| Symbol | rplO |
|---|
| ID | 4080380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2963514 |
|---|
| End bp | 2964041 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638011183 |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | YP_617837 |
|---|
| Protein GI | 103488276 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.481619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA AGCTTAACGA ACTGCGTGAC AACAATGGCG CCCGCAAGGG CCGGATGCGC
GTCGGGCGCG GCATCGGCTC GGGCAAGGGC AAGACCGCCG GCCGCGGCCA GAAGGGCCAG
AAGGCGCGCA GCGGCGTCGC GATCAACGGC TTCGAGGGCG GCCAGATGCC GCTCCACATG
CGTATCCCGA AACGCGGCTT CAACAATATC TTCGGCAAGG ATTTCGCGAT CGTCAATCTG
GGCATGGTCC AGAAGCTGAT CGACGCGAAG AAGCTCGACG CCAAGGCGAC GATCGACCAC
GCCGCGCTCA AGGCCGCTGG CGTCGCCCGC GGTGGCAAGG ACGGCGTCCG CCTCCTCGCC
AAGGGCGAAC TGACCGCCAA GGTGACTTTC GCGGTCGCGG GCGCGTCGAA GGGCGCGATT
GAAGCGGTCG AAAAGGCCGG CGGCAAGGTC GAACTGCCCG AAGCCAGGCC CGAAGGCGAC
GGCAAGAAGG CGACGCGCAA GGCCGAAGCG GCTGCCAAGA ACGCCTGA
|
|---|
| Protein sequence | MTIKLNELRD NNGARKGRMR VGRGIGSGKG KTAGRGQKGQ KARSGVAING FEGGQMPLHM
RIPKRGFNNI FGKDFAIVNL GMVQKLIDAK KLDAKATIDH AALKAAGVAR GGKDGVRLLA
KGELTAKVTF AVAGASKGAI EAVEKAGGKV ELPEARPEGD GKKATRKAEA AAKNA
|
|---|
| |