| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2798 |
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| Symbol | secY |
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| ID | 4080379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2961872 |
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| End bp | 2963245 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638011182 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_617836 |
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| Protein GI | 103488275 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.558016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCTC GCGCCGACCA GCTTGCTTCC AACCTCAATT TCTCGAAATT CGGTCAGGCG
ACCGAACTCA AGAACCGCAT CTGGTTCACG ATCGGCGCGC TGATCGTCTT TCGCTTCCTG
TCGTTCGTGC CGCTTCCGGG CGTCGACCCC GTCGCACTGG CGAACCTCTA TTCGCAGGCC
GCCTCGGGCG GCGTGCTCGA CATCTTCAAC ACCTTCTCGG GCGGCAGCCT CGAGCGCATG
AGCATCATCG CGCTCGGCGT CATGCCCTAT ATCACCGCGT CGATCGTCGT GCAGCTCGCC
GCGGCGCTTT CGCCCAGCCT TGCCGCTCTC AAGAAAGAGG GCGAAAGCGG GCGCAAGAAG
CTCAACCAAT ATACGCGCTA CGGCACCGTC GTGCTCACCG CGGTCCAGGG CTATTTCATC
GCCGTCGGTC TCGAAACGCT CGGTGCGTCG CAGGGGATCG CCGCGGTCGT CGATCCCGGC
ATGATGTTCC GCATCGGCGC CGTCATCTCG ATCGTCGGCG GCACGCTGTT CCTGATGTGG
CTCGGCGAAC AGATCACCAG CCGCGGTATC GGCAACGGCG TCTCGCTCAT CATCATGGCG
GGCATTCTCG CGCAGCTTCC GCGCAGTTTC GCGCAGATGT TCACGCAGGT GCGCGAAGGG
TCGATGGGCG GCGGCACCGT CGTCGCGGTG ATCGTCGGCG GCATCGCCAT CATCGCCTTC
ATCAGCTTCA TGGAGCGGGC GCAGCGCCGC GTCCTCGTCC AGTATCCGAA GCGCGCGACG
CAGCGCGGGG TGATGCAGGC CGATCGCAGC CACCTGCCAT TGAAGGTCAA CACCGCGGGC
GTCATCCCGC CTATCTTTGC CTCGTCGCTG CTGCTCATGC CGCTCACCGT CACGCAGATG
ATGGGCAATA ATGTCCAGGG CGATACCGCG TGGGGCGATT TCCTGATCAC GCTCAATCAA
TATCTCGCGC ACGGCCAGCC GCTCTATATG GCGCTCTATG CCGCAGGCAT CATCTTCTTC
TGCTTCTTTT ACGTCGCGGT CGTCTTCAAC CCCGAAGAAA CCGCCGAGAA TCTGAAGAAG
CAGAACGGCT TCATCCCCGG CATCCGTCCG GGCAAGAACA CCGCCACCTA CCTCGACTTC
GTGCTGACGC GCATCACGGT GATCGGCGCG GCCTATCTCG CGGTCATCTG TCTGGTGCCG
GAGTATTTCA TCGCCCAGTC GGGGCTGCCT TTCTACCTCG GCGGCACCAG CCTGCTGATC
ATCGTCAATG TGACGATCGA CACGATCAGC CAGATCCAGA GCCACATGCT CGCGCATCAA
TATGGCGACC TGATCAAGAA GGCGAAATTG AAGGGTGGCG TTGCGCGGCG CTGA
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| Protein sequence | MASRADQLAS NLNFSKFGQA TELKNRIWFT IGALIVFRFL SFVPLPGVDP VALANLYSQA
ASGGVLDIFN TFSGGSLERM SIIALGVMPY ITASIVVQLA AALSPSLAAL KKEGESGRKK
LNQYTRYGTV VLTAVQGYFI AVGLETLGAS QGIAAVVDPG MMFRIGAVIS IVGGTLFLMW
LGEQITSRGI GNGVSLIIMA GILAQLPRSF AQMFTQVREG SMGGGTVVAV IVGGIAIIAF
ISFMERAQRR VLVQYPKRAT QRGVMQADRS HLPLKVNTAG VIPPIFASSL LLMPLTVTQM
MGNNVQGDTA WGDFLITLNQ YLAHGQPLYM ALYAAGIIFF CFFYVAVVFN PEETAENLKK
QNGFIPGIRP GKNTATYLDF VLTRITVIGA AYLAVICLVP EYFIAQSGLP FYLGGTSLLI
IVNVTIDTIS QIQSHMLAHQ YGDLIKKAKL KGGVARR
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