| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2773 |
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| Symbol | |
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| ID | 4080335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2927701 |
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| End bp | 2930796 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638011156 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_617811 |
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| Protein GI | 103488250 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.848721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA ACCCCGACCG CGCCGCCATT CGCGCCCTCG CCCGTCGCAG CGAAGCCGAC
ATCGTCGCCG GGCTGCGCGC CGCCCTCGCC ACATCGCCGG CCAGCGTCGA GGCGGTGACG
CGGCGCGGGT TGGACCTGAT CCGCAAGGCG AAGGCCGAGG GCGAGCGCGA GACGCTCGTG
GCACAGCTGA TGAACCGGTA TCGCCTGTCG ACCGAGGAAG GCGTCGTGCT GATGTGTCTC
GCCGAGGCGC TGCTGCGCGT CCCCGACAAT GCGACCGCCA ACGCGTTGAT CCGCGACAAG
ATCGCCGGGC GCCACTGGGC CGAGGGCAAC GACGATGACA GCCCGCTGAT CGTCGCGCTG
TCGGCGCGCG GCCTGTCGCT GGGATCGGCG ACCCTGATGC TCGATGCGAT GGGCAGCAAG
GCGAACCCGC TGACGCTTCT GAAGGCGATG ATCCGTCGGT CGGGCGAGCC GGTGATCCGC
CAGGCGGCGC TCGCGGCGAT GAAGCTGCTT GGCCAGCAAT TTGTGATGGG CGAGACGATC
GACGCCGCGG TCAAGCGCGC CGACAGGCAA AAGTCCGAAC TCGCGAGCTT TGACATGCTC
GGCGAGGCGG CGCGCACCGC CGGGGATGCA GCGCGTTATT TTGCCAGCTA TGCCGACGCG
ATCACGCGCA TTGGCAGGGA TGCGAAGCCG GGCGACCCGC ACGCCAACCA CGGCATCTCG
ATCAAGCTGT CGGCGCTCCA TCCGCGCTAC GAATATCTGC AGGCCGCGCG CGTCCGCGAG
GAGCTGATCC CGAAGGTGAT CGAACTCGCA AGGCGCGCGC GCGCGGCGAA CATCCCGCTG
ATGATCGACG CCGAGGAAAG CGATCGGCTG GAACCGCATA TGGACGTGTT CGCGGCACTG
GTCGATGCAG GGATAGCCGA TGGCTGGACC GGGCTCGGCA TCGTCATCCA GGCCTATCAG
AAGCGCGCGC CCGCGGTGAT CGACTGGCTC GCCAAGCGCG CGCGGACGCG CGGGGTCAGG
CTGTCGATGC GGCTCGTCAA GGGCGCCTAT TGGGACACCG AGATCAAGCG CGCGCAGACG
CTGGGCCTCG GCGATTTTCC GGTATTCACC GCAAAGCTGC ACACCGACCT CAACTATATG
CGCTGCGCGC AATTGCTCCG CGACTGTCAG GACTGCATCT ATCCGGCATT CGCCAGCCAC
AATGCGATGA CGCTGGCGTT CGTTGCCGAA CTGTTCGCGG GCGCCGATTA TGAGTTGCAG
CGGCTGCATG GCATGGGCGA AGGCGCGCAC GACGCCCTCG TCGCGCTCTT TCCGCCGCCG
CGGCCGGTGC GCGTCTATGC GCCCGTCGGC ACCCACCGGG ACCTGCTCGC CTATCTCGTC
CGTCGCCTGC TCGAAAATGG CGCCAATTCC AGTTTCGTCC ACCAATTCTC CGACCCCGAC
GTCAGCGCCG AGGAACTGGC GATCGATCCG CGCAGCGTGG CGAGCGCGGC GTCGCCGCCT
ATCGCCACCG GATGGGCGTT GTTCGAGCCG GTGCGGCGCA ATTCGCGCGG TTACGACCTG
GGCGATCCCG GCGTGCCCGA GGCGCTGGTC GCGGCGATCG GCGCCGCGCG GCGCAGCGAC
CGGATCGCGG CGCCGATCGT CGGCGGCGTC GCACGGGACG GACAGGCCGA ACCCGTGCAT
AATCCCGCAA CGGGCGCCCT CGTCGGGCAG GTGGTCGAGG CGGATGCGGC GGCGGTTGCC
GATGCCGTCG CCACCGCGCG CGCAGCGCAA GGCAATTGGA GCCTCGCGGG CGGGGCTTTT
CGGGCCGAGC GGCTCGAACG CGCCGCCGAC CTGCTCGAAG AGCGCGACGC GACCTTCCTT
GGCCTTGCGA TCGACGAGGC GGGCAAGACG CTCGCCGATG CGGTCGCCGA AGTGCGCGAG
GCGGTCGATT TCCTCCGCTA TTATGCGGCG CAGGCGCGCG CCGACTTCAC TTGCCCCGTC
GCGCTCCCCG GTCCGACGGG CGAGCGCAAC GAGCTGATGC TCGAAGGCAA GGGCGTGTTT
GCCTGCATCA GCCCGTGGAA CTTCCCGCTG GCGATCTTCC TGGGGCAGGT GTCGGCGGCG
CTCGCCGCCG GCAATGCGGT GCTTGCCAAG CCCGCCGAAC AGACGCCGCT GATCGCCCAC
GCCGCGGTCG AACTGCTGCT CGAAGCCGGT ATCCCCGGCG ACGTGCTCCA TTACCTCCCC
GGCCGCGGCG AAACCGTCGG CGCGGCGCTC ACGAGCGACC CCGACATCAT CGGCGTCGCC
TTCACCGGCT CGACCGAGGT CGCGCGGATG ATCAACCGCA GCCTCGCCGG GCGCGACGGC
CCGATCGCGA CGTTGATCGC CGAAACCGGC GGCGCCAACG CGATGATCGT CGATTCGACC
GCGCTCCCCG AACAGGTCGC GCGCGATGCC GTCGCCAGCG CCTTTCAGTC GGCGGGTCAG
CGTTGTTCGG CGCTGCGTCT GCTCTGCGTG CAGGAAGATG TTGCCGAAGG GATGATCGAG
ATGGTCGCGG GCGCGATGGC CGAACTCAAT ATCGGCGATC CGGCGATCCT CGCGACCGAC
GTGGGGCCGA TCATCGACGC CGAGGCGCAG GCGAACATCG CTGCTTATGT CGCCGAGGCG
CGCGCCGCGG GCCGCGTGAT CGCCGAGGCA GGCCGTGCGA ACCTGCCCGC GGACGGGCAT
TTCGTGCCGC CGGTGCTCAT CCGGCTCGAT CATGTCACCG ATCTCAGGCG CGAGATTTTC
GGCCCCGTGC TGCACGTCGC GACGTGGAAG GGCGGCGAGC TCGATGCGCT GATCGACGCG
ATCAATGCGT CGGGCTACGG GCTGACATTG GGCGTCCATA CACGCATCGA CGGCGTCGCG
GCGCATGTCG CGGCGCGTGC GCAGGTCGGC AATGTTTATG TCAACCGCAA CCAGATCGGC
GCGATCGTCG GGTCACAGCC GTTCGGTGGC CGCGGATTGT CGGGGACCGG GCCGAAAGCC
GGCGGCCCGC ATTACCTGCT CCGCTTTGCC GAGGAAAAGA CGATCTCGAC CGACATCACC
GCCGCGGGCG GCAATGCGGC CCTGATGGCG GGATGA
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| Protein sequence | MTQNPDRAAI RALARRSEAD IVAGLRAALA TSPASVEAVT RRGLDLIRKA KAEGERETLV
AQLMNRYRLS TEEGVVLMCL AEALLRVPDN ATANALIRDK IAGRHWAEGN DDDSPLIVAL
SARGLSLGSA TLMLDAMGSK ANPLTLLKAM IRRSGEPVIR QAALAAMKLL GQQFVMGETI
DAAVKRADRQ KSELASFDML GEAARTAGDA ARYFASYADA ITRIGRDAKP GDPHANHGIS
IKLSALHPRY EYLQAARVRE ELIPKVIELA RRARAANIPL MIDAEESDRL EPHMDVFAAL
VDAGIADGWT GLGIVIQAYQ KRAPAVIDWL AKRARTRGVR LSMRLVKGAY WDTEIKRAQT
LGLGDFPVFT AKLHTDLNYM RCAQLLRDCQ DCIYPAFASH NAMTLAFVAE LFAGADYELQ
RLHGMGEGAH DALVALFPPP RPVRVYAPVG THRDLLAYLV RRLLENGANS SFVHQFSDPD
VSAEELAIDP RSVASAASPP IATGWALFEP VRRNSRGYDL GDPGVPEALV AAIGAARRSD
RIAAPIVGGV ARDGQAEPVH NPATGALVGQ VVEADAAAVA DAVATARAAQ GNWSLAGGAF
RAERLERAAD LLEERDATFL GLAIDEAGKT LADAVAEVRE AVDFLRYYAA QARADFTCPV
ALPGPTGERN ELMLEGKGVF ACISPWNFPL AIFLGQVSAA LAAGNAVLAK PAEQTPLIAH
AAVELLLEAG IPGDVLHYLP GRGETVGAAL TSDPDIIGVA FTGSTEVARM INRSLAGRDG
PIATLIAETG GANAMIVDST ALPEQVARDA VASAFQSAGQ RCSALRLLCV QEDVAEGMIE
MVAGAMAELN IGDPAILATD VGPIIDAEAQ ANIAAYVAEA RAAGRVIAEA GRANLPADGH
FVPPVLIRLD HVTDLRREIF GPVLHVATWK GGELDALIDA INASGYGLTL GVHTRIDGVA
AHVAARAQVG NVYVNRNQIG AIVGSQPFGG RGLSGTGPKA GGPHYLLRFA EEKTISTDIT
AAGGNAALMA G
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