| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2770 |
|---|
| Symbol | |
|---|
| ID | 4080332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2923581 |
|---|
| End bp | 2925014 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638011153 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617808 |
|---|
| Protein GI | 103488247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC ACGCTGGGAA GGAGCGGAGC CATCGGCCTT GGGGGGCGTT TGTCGCTCTG
GTGGCGCCGC TGCTCGCACT CGTCATGGCG GCGCTCGTCT TTGCTCCTCC GGCACAGTCG
CAGGGCGAAA GCGCTGCGCG CTACACCGGT GTCGCCTCGT GTGCGGGATC GACCTGTCAC
GGCCGGATGG AGGGCGACGG CACCGTCGTG CGCCAGGACG AGCTGATGAC CTGGCAGGAA
CCCTCGACCC CCGGCGGCGC GCACAGCCGT GCCTGGGCGG TGCTCAATAA CAATCGCAGC
CAGTTCATCG CGCGCAATCT TGGCATCGGT GATCCCGCCA AGGCGCAGAT GTGCCTCGGT
TGCCACAGCA CGGCGGGCAC CGCGCGCGGC GTTTCGGCGG AGGACGGCGT CGGCTGCGAA
TCGTGCCATG GCCCCGCGGG CGGCTGGCTT GCGAGCCATT ATGCCGGGGT CGGCACCAAC
GCCGATCCCG ACCGCGAAAT GCGCGACAAG CATCTCGCCA ACCTGTCGGC GGGGCTGAAG
AAGCTCGAGG ATCCGGTGGT GCGCGCGGGC GTGTGCGTCG ACTGCCATTT CGGATCGTCC
GCCGACGGGC AGTTCGTCAC CCACCGCATC ATGGCGGCGG GGCATCCGCG CATTTCGTTC
GAGCTGGATC TCTTTTCCTC GCTCCAGGCG CATCATCAGG AGGACGCCGA TTATGGCTGG
CGCAAGTTCG GCGCGGCGGG ACGGCGCACC GACCATGTCC AGATGTGGGC GGTGGGACAG
GCGGCGGCGA TCGAGCGCAG CCTTGCCCTC TTCCAGACGC GGCGCGGGAC GGAGGGTATT
TTTCCCGAAT TTTATTTCCT CGACTGCCAC AGTTGCCATC GCCGCATCTT CGATCAGGCG
AAGCCGGTGC GCACCGGGCT CGACAATCCG GGCCGCAATC TTCCTGAAGG CATGCCGCCC
TATAATGACG AAAATCTGAT CATGCTCGCC GCCGCGGCGC GCATGGTCTC GCCCGCGCTC
GCCGATCAGC TCGCGGCGCG CACCGCGGCC TTCCACACCG CGATGGCCAC CGACCGGGCG
AGCGCCGTTG CGGCCGCAGC CCGGCTGTCG CAGACGGTCG CGGCGCTGAA GCGCGCGTTC
GCGTCGCGCA GCTTTTCGGG CGCCGATGCC TTCGCGATGG TCGATGCGAT TGCGGCGAAG
GCGATCCGCG ACCGCTATAC CGACTATTCG GGGTCGCAGC AGGCGGTGAT GGGGGTCGAT
ACGCTGCTCA ATGCGATGGT CTCGTCGGGG CGGATCACCG TCGGCGCGGC GGCGGGCATC
CGCGCCGACA TCGACCGTGC CTATGCTGCG GTGAAAGACC CCAATGCCTA TAAGCCCGCC
GAGTTTCAGG CGTCGTTCGC CAGCGCGGTG CGCGCGATCG GGGCGCTCCG CTAA
|
|---|
| Protein sequence | MTAHAGKERS HRPWGAFVAL VAPLLALVMA ALVFAPPAQS QGESAARYTG VASCAGSTCH
GRMEGDGTVV RQDELMTWQE PSTPGGAHSR AWAVLNNNRS QFIARNLGIG DPAKAQMCLG
CHSTAGTARG VSAEDGVGCE SCHGPAGGWL ASHYAGVGTN ADPDREMRDK HLANLSAGLK
KLEDPVVRAG VCVDCHFGSS ADGQFVTHRI MAAGHPRISF ELDLFSSLQA HHQEDADYGW
RKFGAAGRRT DHVQMWAVGQ AAAIERSLAL FQTRRGTEGI FPEFYFLDCH SCHRRIFDQA
KPVRTGLDNP GRNLPEGMPP YNDENLIMLA AAARMVSPAL ADQLAARTAA FHTAMATDRA
SAVAAAARLS QTVAALKRAF ASRSFSGADA FAMVDAIAAK AIRDRYTDYS GSQQAVMGVD
TLLNAMVSSG RITVGAAAGI RADIDRAYAA VKDPNAYKPA EFQASFASAV RAIGALR
|
|---|
| |