| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2767 |
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| Symbol | |
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| ID | 4080329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2915374 |
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| End bp | 2919672 |
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| Gene Length | 4299 bp |
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| Protein Length | 1432 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011150 |
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| Product | LVIVD |
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| Protein accession | YP_617805 |
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| Protein GI | 103488244 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5276] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.494002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.413378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATGC GCAAACTCTT CGCCCTGCTG GCCTTTGTGA CGCTCTGCGC CGCTTTCGGC
GCGAGCGTCG GCCGCGCGGC CGAGGAGGAA AAGCCGCTCA AGATCACCTA TCGCTTCACC
CCGCCCGCGC CGCGCGAGCA GAGCGACGCC GAGGTAGCGG CGAAATCGGC CGGCTGTTAC
AGCTGCCACA CGCGCACCGA CCAGCCGTCG ATGCACGCAA CCCCGGCGGT CAAGCTCGGC
TGCACCGACT GTCACGGCGG CGATTCGACC TCGCCCGCCG CCTTCGGCAA ACCCGAGCTG
GGGTATAAAA ACCCCTACAA TATCGCCGCG ATGAAGGTCG CGCATCCGCA GCCGACCCTG
CCCGGCGCGT GGCACGACAG CTCGGCGAAC CCCGAGCGCA GCTATACCTT GCTCAACAAG
GAGGCGCCCG AGTTCATCCG CTTCGTCAAT CCCAGCGACT ATCGTGTCGC GCGCGAGGCG
TGCGGGGCGT GTCATATGGA GGTGATCGAG GCGACCGAAC GCTCGCTGAT GTCGACCGGC
GCGATGCTGT GGGGCGGTGC GGCGTATAAC AACGGCATCA TCCCCTACAA GAACTACATC
TTTGGCGAGG CCTATACGCG CGCCGGCGAT CCGGCGTGCA TCCTCTCGCC CTCGTCGCGG
CTGACGGCGG AGGAATATGC CGAGGCGTGC AAACCCGCCT TCCCCTCGGA CAAGATATTG
ACCGATGCCG AAAGGAAGCG CGGCGCGCTC GCCAGAATGT ATCCGCTGCC GCGCTGGAGC
GTGATCCCGC CGGGCGACGT GTTCCGCGTC TTCGAGCGCG GCGGGCGCAA CATCAACACG
CAATTCCCCG AAATCGGCCT GCCCAACCCG ACGGGACAGA TCCAGCGGCT CGAGGAGCCC
GGTCGTCCCG ACCTCAAACA GTCGAACCGC GGCCCCGGCA CCGGGCTGCG CGTCGCGATC
CCCGTGCTCA ACATCCACAA GACGCGCCTC AACGATCCCT TCATGTGGTT CATGGGGACC
AACGACCAGC CCGGCGACTA TCGCCATTCG GGCTGCGCGG GCTGTCACGT CATCTATGCC
AACGACCGCG AGCCGCGCCA CAGCCTGACC TATGCCCGGT TCGGCCGCGA CGGCGAAACC
GCGACGATCG ACCCGACGAT CGCGGAGAAA AAATGGAAGG GCGGCGGGCA TGGCGACGAC
GCGCACGCCC CCGACGATGG CCACCATGCC GGCGGCGGCC ATGGCGCCTT GATCGACCCC
GCCGATCCGG ATGTCCCGGC GCGTCCCGGT CACAAGCCGC GCCGCGAATC GGGCCATCCG
ATCAGCCACG CCTTCACCCG CGCAATCCCG ACCGCGCAGT GCATGACCTG CCACATGCAC
CAGCCCAATA TCTTCCTCAA CAGCTACCTC GGCTATACGA TGTGGGACTA TGAATCGGAC
GCGCCGCAGC TTTGGCCCGG CCCTGAAAAC ACCGCGCCGC GCCCGCCGGG GATGAGCGAC
GCGGAGTATC AGGCGAAGTA TAAGCAACAG CGCTATCCGA CCGCCGCCGA AGTGCATCAG
GTGCTCGAAC GCAATCCCGA AGGCGCCGCG CCGCGCGGGC TGTGGGCCGA TGTCGAGTTC
CTGCGCAACG TCTATGACGT CAACGACACC AACAAGGACA CGCAGTTCGC CGATTATCAC
GGCCACGGCT GGAACTTCCG CGGCATCTTC AAGCGCGACC GCAATGGCAA TCTGCTGACC
GCCGACGGCA ATATGGCGAC TTATGGCACC GACACCGCCA ATATCGTCGA TCCCGCCGAC
CCCGAAAAAT GGCGCAAGAG CTGCACGCAT TACAGCGACG CGAAGGAACG CGACCTCTGC
CTTTTGAGCG CCGATCCGGG GCGGCCCGGC GTCGAGGGCA AGTTCGTGCC GCCGGGGATC
AACCCCGGCA AGACGGTGCA TATGATGGAC ATCCACGCCG AAAAGGGGAT GCAGTGCGCC
GACTGCCACT TTGCGCAGGA CGCGCACGGC AATGGCTATA TCCAGGGTGA GGTCGCGAAC
GCGGTCGAGA TCAGTTGCAA GGATTGCCAC GGGACCGCCG ACGCGCTGCC CAATCTGCTC
ACCTCGAACG TCGCGGCGCG GCCGCAGGGG ACCAATCTTG CGCTGCTGCG CAACCCCGAT
GGACGCCGCC GCTTCGAGTT CCAGTATAAT GACGATGCCG AGGTGATCGG GCTGATCCAG
CGCTCGATCG TCGATCCGAA GCTCGAATGG CAGGTCAGTC TCGTCAAGCA ATCGGTGATG
CCGGGGCCGC ATTTCAACGC CAAGGCGGCG CGCGCCAAGC TGATGGCGCG CAGCGGCGCC
GACGACGGCA AGTATGAATG GGGACCGGGT GTTGCCAAGG AGGACCGCGC GCACGGCGAC
GACAAGATGA CCTGCTTCAC CTGTCACCTC AGCTGGACGA CGAGCTGCGG CGGTTGCCAT
CTGCCGATCG AGGCGAACTG GAAAACCAGG ATGCACCATT TCGAGGGCGA GGAGACGCGC
AATTTCGCGA CCTATAATCC GCAGGTGGCG CGCGACGAAA TGTTCCAGCT CGGCCGCCAC
CAGCTTACCA AGCCCGGCGA GCCAGGCCCG AACGGCGAGG TGCGTGGCAT CATCGCCCCG
GTGCGCTCGA CCTCGGCGCT GATCCTGTCA TCGACGAACA TCAATCGCGA GCGCATCTAT
GTGCAGCAGC CGCCGATCTC GTCGGCGGGT TATTCGAGCC AGGCCTTTGC GCCGCATTTC
CCGCACACGG TGCGGCGTCA GGAAACCAAG CAGTGCAGCG ACTGTCATTT ATCGGCCGCC
GACGACAATA ATGCGATCAT GTCGCAGTTG CTGCTGCTCG GCACCAATTT CGTCAACTTC
GTCGGGCTCA ATGTCTGGTC GGGGATGGAG GACGGTTTTC AGGCAACGCG CGTCACCGAA
TGGGACGAGC CGCAGGCGGT GATCGGCAGC TACCTCCACC GCTATGCCTA TCCCGATTAT
TGGAAGCTGC ACGTCGACCA GAACGGCCGC GAGCTGAAAA ACTGGGTGCG CGGCAAGATT
TTCGACGCGA AAGGGTCGGG TGAAACGCGC GCGCTCGAGG AGTTCGCCAA CATCGTTCAG
GACACCAGCG GGCGGGTGAA CTGCCTCCAG CAGCGCGGCG AATATATGTT CGTTGCCGAG
GGCCGCGGGG GCTTCCGCGT CTATGACGTC GCCTCGATCG GCAACAAGGG CTTTTCCGAA
CGCATCGTCC GCGCGCCCTT CTCGCCGCTC GGCCACGACA CGCATGTGAA GACGAAGAAC
GCGACCTGCA TGGCGCTTGC GACGACGCAG CCGATCAGCG TCAGCCGCAA CGAGAATATC
GTCAAGAATT TTCCCGAGAA CCACGAACAG GTGATGCACG CCATCTATCG CTATGCGGTG
ATTACCGACA GTGTCGAAGG GCTCATCCTC GTCGATGTCG ACACGCTCGC GGACGGCGAG
TTTCGCAACA ACCGGCTGAA GCGCGCACTG ACATGGAACG AGGGCAATGT GCTCGCGGGC
GCGCGGCACG TCACGCTCGC GGGCAGCTAC GCCTATATCA CCACCGATGC TGGGCTGGTC
GTGCTCGACC TCTCGACCCC TCTCCAGCCA AAGGTCACCG CGCAACTGCC GCTCACCGAC
GCGCGCGCCA GCGCGGTGCA GTTTCGTTAC CTCTGGGTCA CCGATGCCGA GGGGGTGAAG
CTGTTCGACG TCACGAACCT GGCGCAGCCG GTCGCAGTGC CATCGGGCAC GGTACGCCTC
GCCAATGCGC GCAAGCTCTA TCTCGCGCGC ACCTATATGT ATGTCGCGGC AAAGACCGAC
GGGCTGGTCA TCGTCGATGT GACGCGCCCC GCGTCGCCGC TCGCCTGGCC GCCGCTGACC
TTTGACGGCG CGATGCAGGA TGCCGAGGAT GTGATCGTCG CATCGACCAA CGCCTCGCTC
TTCGCCTATG TCGCCGACGG GCGCAGCGGC ATCAAGGTGA TCCAGCTCAC CAGCCCGAAC
AACCCCGGCC TCTATGGATT CTCGCCCAGG CCGACGCCCG AGCTGATCGC CTGGGCGAAA
ACGCCCTCAC CTGCGCTCGC GCTGTCAAAG GGTCTCGACC GTGATCGTGC GGTCGACGAG
ACCGGCGGAC AGATGGCGGT GTTCGGCCGC CTGGGATCGC GGCCCTTCAC CCGCGGCGAG
ATGGAAAAGC TGTTCCTGAA CAGCAAGGGG CTGGTCTACA AGGTCCGTGA CGAAGTCGAC
GAAAGCGCCT GGCGGCCGCC GCTGCTTTAC ACGCAATGA
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| Protein sequence | MVMRKLFALL AFVTLCAAFG ASVGRAAEEE KPLKITYRFT PPAPREQSDA EVAAKSAGCY
SCHTRTDQPS MHATPAVKLG CTDCHGGDST SPAAFGKPEL GYKNPYNIAA MKVAHPQPTL
PGAWHDSSAN PERSYTLLNK EAPEFIRFVN PSDYRVAREA CGACHMEVIE ATERSLMSTG
AMLWGGAAYN NGIIPYKNYI FGEAYTRAGD PACILSPSSR LTAEEYAEAC KPAFPSDKIL
TDAERKRGAL ARMYPLPRWS VIPPGDVFRV FERGGRNINT QFPEIGLPNP TGQIQRLEEP
GRPDLKQSNR GPGTGLRVAI PVLNIHKTRL NDPFMWFMGT NDQPGDYRHS GCAGCHVIYA
NDREPRHSLT YARFGRDGET ATIDPTIAEK KWKGGGHGDD AHAPDDGHHA GGGHGALIDP
ADPDVPARPG HKPRRESGHP ISHAFTRAIP TAQCMTCHMH QPNIFLNSYL GYTMWDYESD
APQLWPGPEN TAPRPPGMSD AEYQAKYKQQ RYPTAAEVHQ VLERNPEGAA PRGLWADVEF
LRNVYDVNDT NKDTQFADYH GHGWNFRGIF KRDRNGNLLT ADGNMATYGT DTANIVDPAD
PEKWRKSCTH YSDAKERDLC LLSADPGRPG VEGKFVPPGI NPGKTVHMMD IHAEKGMQCA
DCHFAQDAHG NGYIQGEVAN AVEISCKDCH GTADALPNLL TSNVAARPQG TNLALLRNPD
GRRRFEFQYN DDAEVIGLIQ RSIVDPKLEW QVSLVKQSVM PGPHFNAKAA RAKLMARSGA
DDGKYEWGPG VAKEDRAHGD DKMTCFTCHL SWTTSCGGCH LPIEANWKTR MHHFEGEETR
NFATYNPQVA RDEMFQLGRH QLTKPGEPGP NGEVRGIIAP VRSTSALILS STNINRERIY
VQQPPISSAG YSSQAFAPHF PHTVRRQETK QCSDCHLSAA DDNNAIMSQL LLLGTNFVNF
VGLNVWSGME DGFQATRVTE WDEPQAVIGS YLHRYAYPDY WKLHVDQNGR ELKNWVRGKI
FDAKGSGETR ALEEFANIVQ DTSGRVNCLQ QRGEYMFVAE GRGGFRVYDV ASIGNKGFSE
RIVRAPFSPL GHDTHVKTKN ATCMALATTQ PISVSRNENI VKNFPENHEQ VMHAIYRYAV
ITDSVEGLIL VDVDTLADGE FRNNRLKRAL TWNEGNVLAG ARHVTLAGSY AYITTDAGLV
VLDLSTPLQP KVTAQLPLTD ARASAVQFRY LWVTDAEGVK LFDVTNLAQP VAVPSGTVRL
ANARKLYLAR TYMYVAAKTD GLVIVDVTRP ASPLAWPPLT FDGAMQDAED VIVASTNASL
FAYVADGRSG IKVIQLTSPN NPGLYGFSPR PTPELIAWAK TPSPALALSK GLDRDRAVDE
TGGQMAVFGR LGSRPFTRGE MEKLFLNSKG LVYKVRDEVD ESAWRPPLLY TQ
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