| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2766 |
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| Symbol | |
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| ID | 4080328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2914805 |
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| End bp | 2915296 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638011149 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_617804 |
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| Protein GI | 103488243 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.555394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGACA TCATCGCCCT TTGCCAGCTG CTCTTCGTGC TGCTGCTGCT CGTCGCGGCG
GCATCCGATC TGCGCTATCG GCGCATTCCG AACCTGATCC CGGCGCTCAT CGTCCTGCTT
TTCATCGTCG GCTGGCTGCT GGGCTTTCCA TTCACCGGCC CCTGGTGGGC GCATGGCTTT
CACTTCGTCG CGGCGTTGCT CGTCGGCATG CTGCTTTTTC GTTTCGGATG GTTTGGCGGT
GGCGACGCCA AATTATACGC CGCCTGTGCG CTGTGGTTCT CGTTCAGCGA CGCCCTGTTG
CTGATGTTCG TCACAACCGC GTCGGGGGCC GTCATCGTGC TTGTGCGCGC GCTGGCGATC
GTTGCGAGGT CGATCTTCGG ATCCCCCGGC GCGCCCCCCG ACGGCCCGCG CCAGAAGCGC
GCGCCCCGTA CCATTCCCTA TGGCATCGCA ATCGCGGCTG GGGGCATCGC ATCCCTTTAC
TCGGTCTATT AG
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| Protein sequence | MIDIIALCQL LFVLLLLVAA ASDLRYRRIP NLIPALIVLL FIVGWLLGFP FTGPWWAHGF
HFVAALLVGM LLFRFGWFGG GDAKLYAACA LWFSFSDALL LMFVTTASGA VIVLVRALAI
VARSIFGSPG APPDGPRQKR APRTIPYGIA IAAGGIASLY SVY
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