| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2763 |
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| Symbol | |
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| ID | 4080325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2912038 |
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| End bp | 2913018 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011146 |
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| Product | type II secretion system protein |
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| Protein accession | YP_617801 |
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| Protein GI | 103488240 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.613586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAGG TTCTTGCATC ATCGCCCTAT CTCCGGCTCG GCTTTCTCGT CCTCCTGTTC
GTGATCGTCT CGTCGCTGGT CTATTTCGGG GTTCGGCTGA TACTCAGCCG GCGCGTCATA
TTGAGCCGTC TCGAATCGCC GGCCCTCCCC GGATCGCACC GCGACGATTC GGATGGCCTG
AGGGCCGCCG ATGTCCGCTC GGGCGCATGG GCAAAGCTTG CCGCCACGAT CGAGCAGAGC
GGCCTGTCGC TTGGCGATTC GAACCCGCAG GGGCTGCGTC GACGGATGCT CGCCGCCGGC
TATCGGTCGC CGCACGCGCC GAAGATTTAT ACCTTGTTGC GGCTCGCACT CATCTTTGCG
CTCCCTTCGG CGCTCGTTCT GCCGCAGCTT CTTTCCGAAA CGCCCGTCGA CCTGTTCATG
CTGTACCTCC AGGGTGCCGG CCTTGCCTTG ATGGGGCTCG TGATTCCCAG CCTCTTCCTG
ACCGCCAAGG CCGACCGGCG GCGGCAGGAG ATATTGAACG GATTCCCCGA CTGTCTCGAT
CTCATGCTGG TCTGTGTCGA GGCGGGCATG GGACTGGAGG CCGCGCTCGA TCGCGTTGGC
CGCGAAATGA CGCTCTCGCA CCCGCTTGTT GCCGAACAGA TCTCGCAGAC AACGCTCGAA
CTGCGCGCCG GCGCGAGCCG CGAGGAAGCC CTGCGCGCGC TCGCCGATCG CAGCGGCGTC
GACGAGATCC GGGCCTTTGC GACCCTGCTG ATCCAGTCGG ACAAGCTGGG CTCCAGCATT
GCGACGACGC TCCGCATCTA TGCGGCCGAA ATGCGCGAGA AACGCCGGAT GCGCGCCGAG
GAAAAGGCGC ACCGGCTTCC CGTGCTGCTC TCCATACCGC TGGTGGCCTG CATGTTGCCG
GTGATGATCG GCGTGCTGAT GTTGCCTGCC GTCATTCGCG TGATCCGCGA CATCGCGCCC
GCGCTTGCAG GAGGAGGATG A
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| Protein sequence | MVEVLASSPY LRLGFLVLLF VIVSSLVYFG VRLILSRRVI LSRLESPALP GSHRDDSDGL
RAADVRSGAW AKLAATIEQS GLSLGDSNPQ GLRRRMLAAG YRSPHAPKIY TLLRLALIFA
LPSALVLPQL LSETPVDLFM LYLQGAGLAL MGLVIPSLFL TAKADRRRQE ILNGFPDCLD
LMLVCVEAGM GLEAALDRVG REMTLSHPLV AEQISQTTLE LRAGASREEA LRALADRSGV
DEIRAFATLL IQSDKLGSSI ATTLRIYAAE MREKRRMRAE EKAHRLPVLL SIPLVACMLP
VMIGVLMLPA VIRVIRDIAP ALAGGG
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