| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2762 |
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| Symbol | |
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| ID | 4080324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2911035 |
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| End bp | 2912036 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638011145 |
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| Product | type II secretion system protein |
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| Protein accession | YP_617800 |
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| Protein GI | 103488239 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.58237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG CAGCCATCCG CTTTCTGATG ATGCTGGCGC TTTTTGCGCT GGTCGTCCTG
CTCGCGCAGG CGGTGATCGG CTTCGTCGTC GAACGAAGCG GCAAGAGCCG GGCCGTGAAT
CGCCGGCTTC GCCTGATCGA GTCGGGGGTC GATCGCGAGG CGGTGACGTC CCTGCTCCGC
AAATCGCTGC CGCGCAGACT GGAAGGCGTC CCGCCATGGG CAGCGAGCAC CCTGCAATCC
TTCCGCCGGC TGCTGAACGC AGCGAACATC GGCATGGGCG AACTTCAGTT GCTGGGGCTG
ATGCTGGTCG GCGCGGTGAC GGTCATGTTC ATCATCCTGG TCGCGGCGGG CCTGACCGGC
TTTCCCATCA CCCTCGGCGT CGTGCAGCTC GGGCTTGTCA TCGGCATCGT CGTCGCATTC
CTGTTGCCAT GGATGGTGAT CACGCGCCTT GCCGATCGTC GGCGTCGGCG GATGGAGCAG
CAGTTCCCCA TCGCCCTGGA CATTTTTGTG CGCGGCTTGC GGTCGGGGCA TCCGATTCCG
GCCGCCTTGC AGCTTCTGAC GGTCGAGATG GAAGATCCGA TCGGCACCGA GTTCGGCATC
GTCACCGACG AGATCGCCTT CGGCCTCGAC CTGCGCGAAG CGCTGGCGCG CATGGCCGAA
CGCTGGGGTC TGCCCGACAT GCACATGTTC GTCGTGTCGG TGTCGGTGCA GATGGAGACA
GGCGGCAACC TTGCCGAGAT TCTCGAAAAT CTGAGCAAGG TCATCCGCGA CAGGGCGAGC
ATGTTCATGA AGGTGCGCGC GCTGAGTTCC GAAGGCCGCA TGACCGCGGT CATTCTGACC
GCGCTGCCGA TCCTTGCCTT TGTCGGCCTG TTCCTCACCA ATCCGGTCTT CTATCTCGAC
GTCGCGACCG ATCCGATTTT CTTCATCGGC TTCGGCGGAT TGATCCTCCT TTATCTGGTC
GGATTCTTCA CCATCCGGCG CATGATCGAC CTGAAGGTGT AA
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| Protein sequence | MNDAAIRFLM MLALFALVVL LAQAVIGFVV ERSGKSRAVN RRLRLIESGV DREAVTSLLR
KSLPRRLEGV PPWAASTLQS FRRLLNAANI GMGELQLLGL MLVGAVTVMF IILVAAGLTG
FPITLGVVQL GLVIGIVVAF LLPWMVITRL ADRRRRRMEQ QFPIALDIFV RGLRSGHPIP
AALQLLTVEM EDPIGTEFGI VTDEIAFGLD LREALARMAE RWGLPDMHMF VVSVSVQMET
GGNLAEILEN LSKVIRDRAS MFMKVRALSS EGRMTAVILT ALPILAFVGL FLTNPVFYLD
VATDPIFFIG FGGLILLYLV GFFTIRRMID LKV
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