| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2720 |
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| Symbol | trmD |
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| ID | 4082421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2868247 |
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| End bp | 2868984 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011103 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_617758 |
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| Protein GI | 103488197 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCA CCGCCGTTCC CCTAACCCTT TACCCCGACA TGTTTCCCGG CCCGCTCGGC
CACAGCATGG CGGGGCGTGC GCTCGAAAGC GGGACGTGGA ATTGTGCGCC GGTACAGATT
CGCGATTTCG CGACCGACAG GCATCGCACC GTCGATGACA CGCCCGCGGG GGGCGGCGCG
GGGATGGTGC TCAAGGCCGA CGTTCTGGCG GGCGCTATCG ACCATGCGAT GAAGGCGCAT
CCGGGCCTGC CCGTCCTCGC CATGACCCCG CGCGGGACGC CGATCACCCA GGCCCGCGTG
CGCGAGCTTG CGGCCGGTCC CGGCGCGATC ATCCTGTGCG GCCGGTTCGA GGGATTCGAC
GAACGCATAT TCGACGCGCG CCCGATCGAA CAGGTTTCGA TGGGCGACAT CATCCTGTCG
GGGGGCGAGA TGGCGGCGCT GCTGCTGCTC GACGCTTGCA TTCGGCTGCT TCCCGGCGTA
ATGGGCGCGG CTTCTAGCGG CGACGACGAA TCGTTCGAGA ATGGTTTGCT CGAATATCCG
CACTATACCC GGCCCGTCAC TTGGGAAGGG CGCACGATCC CCGAAGTGCT GCGATCGGGG
GATCATGCGA AGATCGCCGC CTGGCGGAAA CAACAGGCGG AAGAGGCAAC ACGGTTACGC
AGGCCGGACC TTTGGGAGCG TCATATCGAT GCTCGGGCCC GACCTGCCTC TGGCGCGCGG
CGAAAAGAAG AGGACTAG
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| Protein sequence | MSFTAVPLTL YPDMFPGPLG HSMAGRALES GTWNCAPVQI RDFATDRHRT VDDTPAGGGA
GMVLKADVLA GAIDHAMKAH PGLPVLAMTP RGTPITQARV RELAAGPGAI ILCGRFEGFD
ERIFDARPIE QVSMGDIILS GGEMAALLLL DACIRLLPGV MGAASSGDDE SFENGLLEYP
HYTRPVTWEG RTIPEVLRSG DHAKIAAWRK QQAEEATRLR RPDLWERHID ARARPASGAR
RKEED
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