Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2713 |
Symbol | |
ID | 4082414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2860411 |
End bp | 2861235 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638011096 |
Product | HemK family modification methylase |
Protein accession | YP_617751 |
Protein GI | 103488190 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGTGAGG TAGCGCAGAG GCTGCGCGAT GCGGCGCAGC GGCTCGCCGC GGTGTCGGAC ACGCCGCGGC TCGATGCCGA ACTGCTGATG GCCGACGCGC TGGGGATCGA GCGGCAGGCG CTGCTGCTCG ACCCGGCGCG TTACGATGTC CCGGCGGACT TCGACGCGCT GGTGGAACGG CGCATGGCGC ACGAGCCCGT CGCCTATATC CTCGGCTACC GCGATTTCTG GACGATCCGG CTGGCGGTCG GTCCCGGCGC GTTGATCCCG CGACCCGACA GCGAGACGCT GATCGCGGCG GCGGTGCAGC ATTTCGGCGC GGCGGGGCCG CGGCATATTC TTGACCTCGG CACCGGACCC GGGACGCTGC TGTTTGCGGC CATGAGTGAA TGGGCCGATG CGCGCGGGCT TGGCGTCGAT GCCAGCGACG TGGCGCTCGG CTATGCGCGC GCCAATGCGA TCGCGCTTGG GCTGGCCGAT CGTGTCGGGC TGATGCAGGG CGATTGGGCG GCGGGCGTCA CCGGCCGGTT CGACCTCATC CTCTGCAACC CTCCCTATAT CGCAGAGAGC GAAGCGTTGA TGCCCGATGT CGCCGATCAC GAGCCTGCCG GTGCGCTGTT CGCCGGCGCC GATGGCCTCG CCGATTATCG CCGTATCATC CCCGACCTGC CGCACCTGCT TGCGCCCGGT GGCATCGCCA TCCTTGAAAT CGGCCACACG CAACGCATAT CGGTGAGCGA GATGGCCGAC GCGGCAGGGT TCGCTGTCGC CTGTCGCCAG GATCTGGCTG GCCGCGACCG GGCGCTTTTG CTGACGTTCG CCTGA
|
Protein sequence | MGEVAQRLRD AAQRLAAVSD TPRLDAELLM ADALGIERQA LLLDPARYDV PADFDALVER RMAHEPVAYI LGYRDFWTIR LAVGPGALIP RPDSETLIAA AVQHFGAAGP RHILDLGTGP GTLLFAAMSE WADARGLGVD ASDVALGYAR ANAIALGLAD RVGLMQGDWA AGVTGRFDLI LCNPPYIAES EALMPDVADH EPAGALFAGA DGLADYRRII PDLPHLLAPG GIAILEIGHT QRISVSEMAD AAGFAVACRQ DLAGRDRALL LTFA
|
| |