| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2703 |
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| Symbol | |
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| ID | 4081912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2845253 |
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| End bp | 2845861 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011080 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_617741 |
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| Protein GI | 103488180 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.37559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCATC CTCCGCAGCG GCATTCAATC GCATCGTCGA TCGATCCGGC GTTCGTCGCG
CGCGTGCGCG GCGACCTGCT CCGCTTCGCG CGTCTCCAGC TCGGCAGCGA CGACGAAGCC
GAGGATGCGG TGCAGGAAGC CCTCGCCGCG GCGCTGCGCA ACGGCGATCA GTTTCGCGGC
GAGGCGGCGC TCAAGACCTG GATGATCGCC ATCCTGAAGA ACAAAATCGC CGACCTCTTG
CGCCAGCGCC GACGCCGTCC GCTCGGCGCG AGCCAGATGG CGGCCGAGGA GGAGGATGGC
GGCACGCTTC CGGCGCTGTT CGACGAGCGC GGCATGTGGC GCGAAGCGGC GCGGCCCGCG
GCATGGGAAA ATCCCGAGGC GGGGCTGCAC AGCGACCAGT TCCTCGCCAT TTTCGACGCC
TGCCTGAACC GGCTGCCGGC GCAGCAGGGC CAGGTGTTCA TGATGCGCGA AGTGGTCGAA
CTCGCCACCG ATGAAATTTG CGACGAGCTT GGTCTCACCA GCGGGAACAT CCATGTCATC
CTGCACCGCG CGCGGCTCGC GCTGCGCGCC TGTCTCCAGC ATCACTGGTT CGCGGAGGCG
GTGCGATGA
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| Protein sequence | MAHPPQRHSI ASSIDPAFVA RVRGDLLRFA RLQLGSDDEA EDAVQEALAA ALRNGDQFRG
EAALKTWMIA ILKNKIADLL RQRRRRPLGA SQMAAEEEDG GTLPALFDER GMWREAARPA
AWENPEAGLH SDQFLAIFDA CLNRLPAQQG QVFMMREVVE LATDEICDEL GLTSGNIHVI
LHRARLALRA CLQHHWFAEA VR
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