| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2698 |
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| Symbol | |
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| ID | 4081907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2838769 |
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| End bp | 2841801 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011075 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617736 |
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| Protein GI | 103488175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.396614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCTCT TCGCGCGTCT CTCGGCTGGT GCCGCCGCAT CAGCCCTTGC TATCGGCTTT
GCGCTGCCTG CCTCGGCGCA GCAGGCCGGC ATCCAGATCG CCGTGGTCGC CGACGATGGG
CGTGCTTTGC CCGATGTCGA GGTGCTGGTG GAGAATCCGG GCATCGGCTT TCGCCGCATC
GTCCGAAGCG ATGCGCAGGG GCTGGCGCGG GTCGAGGGAC TGACCACGGC GGGCGAGTAT
CGCGTCTCGG CGCAGGCCAG CGATCGCTTT GAACCGGGCG AGCCGGCGCG CCTTTCGCTG
CGCGCCAATT TTTCAAGCAG CGTGACGCTG AGGCTTGTCC CGGCCGGGAC TGCGATCGTC
GTTACCGGCA GGCGCGGCAT CACCGCGCTC AACAGCGTCA ATGCCGAAGT GTCGGCATCG
CTCGGCCGCG AGGAGCTTGT CGCGCTGCCG ATCGAGGGAC GCGACGTGCT GGGCGCGCTG
ATCCGGCTGC CGGGCGTCGT GCCCTCAACC GGCTTTTTTC CCGAGGCGCC GTCGATTTCG
ATCAACGGAT CGAACGGCCT CGACACCCAT TATCTGATCG ACGGGCTCGA CAATAACGAG
AATTTCCTCG GCGGGATCAA GTTCCCGGTG CCGCTCGGTT TCACGCGCGA GGTGACCGTG
CTCGCGAACA GCTATTCGGC GGCTTATGGC CGCACCGCCA ATGGCATCGT CAACTATACC
ACGCCATCGG GCACCAACGA CTATCATGGC GAAGTCTATG CGCTGGTGCG TCCGGGGCGC
CCCTTCGATG CCCGCTCGCC CTTTCCGCGC CGCGACCTTT CGGGCAATCC GGTCGGCGAG
AGCTTCGAGC GCTACCAGGC GGGCGCGAGC CTCGGCGGAC CGATCGTGCG CGACCGCACC
TTCTTTTATG CCAATTTCGA ATATACGCGC GATCGCAATG TCCAGATCGT CGATGCGCCC
GCGCTTGGCA CCGTCGCCAA TGTGACCGGC AACAATCAAT TTTATCTCGG TTCGCTGCGC
CTCGATCACC GCCTCACCGC CGACTGGACG CTCGGGCTGC GCGCCAATGT CGGCCGCGTC
ACCATCGACC GTCCGGGCGG CGGGCTCGGC GGCGGCAATG TCACCTTTCC TTCGGCGGGG
TCGGACCAGG ATCGCTTCTC GACCCTGGTT GCCGCGACCG CGAGCTACTC GGGCGATGTC
TGGAGCTATG ACGGTGCGCT CCAGTTCAGC CGCTTCCGCT GGAATTACGG CAAGCCGAAG
GGACCCGCGG GACCGCAAGT CACCATCCGC GATCCGAGCG GGCTCACGGT CGGTGTCGTC
GGCCATCCGG GTTTCGTCTT TGACGATGTC GAGGAAAGCT GGCAGACGAC CCACCGCGTG
CAACGACGGC TCGGCAACCA TCGCCTGCGT TTCGGCGCCG ATCTCATCCA TTCCGATTTT
TCACTCCTCG GGGGCGGAAA TCCCGACGGC AACTACATCG TCGATCTGAC CGCCTCGCAG
TTGTCCCAAC TGGCAGCGGG CGGGCGGGGG CTCGCCCTTT CGGCGGACGA TGTCCTCGCG
CTCGATCCCG CGGTCGCCAA TTATTCGGTC GAGCTCAGGC CGCAGTCGTT CGGCACCGGC
CAGACCCAGA TCGCCTTCTA TGTCGAGGAT GAATGGCAGT TGTCGCCGCG CCTGACCGCG
ACGTTCGGCG TGCGCTGGGA TTATGACAGC CTGACCGCCA AAGGCGGCGG CGGCGATTAT
GACAATGTCG CGCCGCGTCT GGCGCTCAAT TACCGGCCCG ATGCGCGTTC GACGCTGCGC
TTCGGCGCGG GGATTTTCAC CGGCAAGCTT TCCTATGCCG TGATTTCGGA CGCGCTCCAG
CGCAATACGA CTTCGGCGGG CTTTCTGACC CAGCTGGGGT CGCTGCAGGC GCAGGGCATC
ATTCCGGCTG GCACCGATGT TTCGGCATTG ACCTTCGCCG GCAATCTTGG CGTGTCGCCG
CCCTGCGCGA CGGTGTCGAC CTGCCCGACC CCGGCGGAGG TTCAGGCGCT GCGCGAGACC
GCCACGCTGG GTGAAGCCCG CATCCTCGGC CCGACCGGCT ATCGCAGCCC GTGGAGCCTC
CAGCTCAGCG GCGGCTATCA ATATCAGGCG AACGACACGC TGACCCTGAG CGCCGATCTC
GTCTACAGTC GCACGCATAA TCTCGTCCGG CTCCGCGACC TCAACGCGCC CGCGCCTTTC
ACGCCCAATC TCGCCAACCT CACCGACGCC AATATCGCGT TGCTGCGCGC GCAACAGGAC
AATGCGGCGC GCTTCGCGCT CGCCGAGGCG CTCGGTCTCG TTCGCTCGCA GGCGGCCGCC
GATGCAACCC GGCCGGTAGC ACTAGTGGCC GGCGGCGCGC GCCAGATCAC CGTGTCGGAA
ACGGCGGGCG AGTCCGAATA TAGGGCGCTG ATCCTGCAAC TCGCCAAGGC CCGCGGCAGC
GATGCATATG CGTTCCGCCT GTCCTATACG CTCTCGAAGC TCAGCAACGA TACCGACGAC
ATCAACTTCC GGGCGTCCAA TTCCAACGAT TTTTCCGCCG AATGGGGCCC ATCGGCCAAC
GACCGCCGAC ACGTCATCTC GGCGGTCGGC TATCTTTATC CGCTGAAGGG CCTGACGCTC
AGCGTCGCAG GGCTTTTCCA GTCGGGCCAG CCGGTGAACC TCGTCCCCGA TGCGCGGATT
TTCGGAACGC AGGATCTCAA TGGCGACGGC GCCTCGTTCG GCGAGAATTT CGTCGGCAAC
TCGGACCGCT ATCCGGGCGC CGCGCGCAAT TCGGCGCGGC TGCCCTGGTC GGCGACGGTC
GATGTCGGGC TGCGTTATGC GATTCCCGCC TTCGACGGCC GGATCGAGCT CAGCGCCGAT
GTCTTCAATC TGTTCAACGC CAACAATGAA TCGGGCTTTG CGAATGCCGC GACAACGTCC
AATCAGGTGC AGTTCGGTGG CGGGGCGCCC TTCGTGCAGC GCAATGCCGG GCCGCCGCGC
CAGTTCCAGT TCGGCGCGGC ATGGAAGTTT TAG
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| Protein sequence | MTLFARLSAG AAASALAIGF ALPASAQQAG IQIAVVADDG RALPDVEVLV ENPGIGFRRI
VRSDAQGLAR VEGLTTAGEY RVSAQASDRF EPGEPARLSL RANFSSSVTL RLVPAGTAIV
VTGRRGITAL NSVNAEVSAS LGREELVALP IEGRDVLGAL IRLPGVVPST GFFPEAPSIS
INGSNGLDTH YLIDGLDNNE NFLGGIKFPV PLGFTREVTV LANSYSAAYG RTANGIVNYT
TPSGTNDYHG EVYALVRPGR PFDARSPFPR RDLSGNPVGE SFERYQAGAS LGGPIVRDRT
FFYANFEYTR DRNVQIVDAP ALGTVANVTG NNQFYLGSLR LDHRLTADWT LGLRANVGRV
TIDRPGGGLG GGNVTFPSAG SDQDRFSTLV AATASYSGDV WSYDGALQFS RFRWNYGKPK
GPAGPQVTIR DPSGLTVGVV GHPGFVFDDV EESWQTTHRV QRRLGNHRLR FGADLIHSDF
SLLGGGNPDG NYIVDLTASQ LSQLAAGGRG LALSADDVLA LDPAVANYSV ELRPQSFGTG
QTQIAFYVED EWQLSPRLTA TFGVRWDYDS LTAKGGGGDY DNVAPRLALN YRPDARSTLR
FGAGIFTGKL SYAVISDALQ RNTTSAGFLT QLGSLQAQGI IPAGTDVSAL TFAGNLGVSP
PCATVSTCPT PAEVQALRET ATLGEARILG PTGYRSPWSL QLSGGYQYQA NDTLTLSADL
VYSRTHNLVR LRDLNAPAPF TPNLANLTDA NIALLRAQQD NAARFALAEA LGLVRSQAAA
DATRPVALVA GGARQITVSE TAGESEYRAL ILQLAKARGS DAYAFRLSYT LSKLSNDTDD
INFRASNSND FSAEWGPSAN DRRHVISAVG YLYPLKGLTL SVAGLFQSGQ PVNLVPDARI
FGTQDLNGDG ASFGENFVGN SDRYPGAARN SARLPWSATV DVGLRYAIPA FDGRIELSAD
VFNLFNANNE SGFANAATTS NQVQFGGGAP FVQRNAGPPR QFQFGAAWKF
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