| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2687 |
|---|
| Symbol | |
|---|
| ID | 4081838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2830502 |
|---|
| End bp | 2831257 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638011064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617725 |
|---|
| Protein GI | 103488164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTGC TGCTTGGCAT CGGGCGGCTG CTGGCCGGAT ATCTGACAGG TCCGTCGCGG
GCGCCCTATG CCAATGTTCC CACGGACGAA TCCGCTCTGG CCGCCACGAT CATGACCGGC
GATGTGTTGT TGGTGGAAGG TCGCCAGCGT GTCAGCACCG CGATCAAATA TCTTACCCAA
TCGACCTGGT CGCATGCGGC ACTCTGTGTC GAAGCGTCCG GCGATCGGCC GTTATTTGTC
GAAGCCGACG CGATCGAAGG GGTCCGGCTC GTCACCAGCG AGGAATTCGC AGGTCTCCAC
TGCCGGATAT GCCGTCCGGT GGGACTGGAC GAGGATGAGA TCGACGCGGT GACCGGTTTT
GCTCGCGCGC ATATCGGCGA CGCCTATGAC CTTGCCAATG TCGTCGACCT CGCCCGCTTT
CTCTGTCCGA CGCCGCCCGT GCCTTCGCGC TGGCGCCGCC GCATGATCGC GCTCGGCAGC
GGCGAACCCA CCAAGGCAAT ATGCTCGACC CTGATCGCGC AGGCATTTCA GTCGATCGGC
TACCCGATCC TGCCCGAAAT AACGCAAGAA TTGATCGACG ATCCGAATTG CCTCGGCTGC
GTGCGCGACA TCCTGCATAT CCGTCATCAC AGCCTGTTCA CGCCGCGCGA TTTCGACGTT
TCTCCCTATT TCGAAATCGT CAAGCCGACG CTGGCTCGCG GCTTCGATCA TCATTCGCTG
TCGTGGGCCG TGGTCGGGGT ACAGGTGATG CCATGA
|
|---|
| Protein sequence | MGLLLGIGRL LAGYLTGPSR APYANVPTDE SALAATIMTG DVLLVEGRQR VSTAIKYLTQ
STWSHAALCV EASGDRPLFV EADAIEGVRL VTSEEFAGLH CRICRPVGLD EDEIDAVTGF
ARAHIGDAYD LANVVDLARF LCPTPPVPSR WRRRMIALGS GEPTKAICST LIAQAFQSIG
YPILPEITQE LIDDPNCLGC VRDILHIRHH SLFTPRDFDV SPYFEIVKPT LARGFDHHSL
SWAVVGVQVM P
|
|---|
| |