Gene Sala_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2679 
Symbol 
ID4081830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2825537 
End bp2826007 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID638011056 
ProductDoxX 
Protein accessionYP_617717 
Protein GI103488156 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.777331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTG TTACGCTTTA CGATCGGGTT ATCAACTGGG TAGCGGGACG GATTCCCGAA 
GGCTTCGCGC TGTTATTCAT GCGCGTGGTG CTGGCAGGAA TCTTCTGGCG ATCCGGCCAG
ACCAAGATTG CCGAGGGCAC ATGGTTCACA ATCAGCGAAA ATACCTTTTA CCTTTTTCAG
GACGAGTATA GCGGGGTGCC GCTGCCCAGC GATCTTGCCG CCGTGATGGC CACGGTCTCC
GAGCATCTGT TTCCGATTTT GCTCGTGCTC GGCCTGTTCA CCCGGCTTTC GGCCTTTGCA
CTGCTGGGCA TGACAATGGT GATCCAGATC TTTGTTTATC CCGATGCCTG GTGGCAGGTG
CATTCGCTTT GGTTTGCCAT GGCGCTCATC CTCATCGTTC GCGGCGGCGG GTGGCTGTCA
CTCGATTCGG TGTTGGTCCG CAGGCTGCGG GGCGACCGGG CAGCAGCATG A
 
Protein sequence
MLVVTLYDRV INWVAGRIPE GFALLFMRVV LAGIFWRSGQ TKIAEGTWFT ISENTFYLFQ 
DEYSGVPLPS DLAAVMATVS EHLFPILLVL GLFTRLSAFA LLGMTMVIQI FVYPDAWWQV
HSLWFAMALI LIVRGGGWLS LDSVLVRRLR GDRAAA