Gene Sala_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2672 
Symbol 
ID4081880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2818357 
End bp2819259 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content70% 
IMG OID638011049 
ProductGTP cyclohydrolase II 
Protein accessionYP_617710 
Protein GI103488149 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.371178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.94749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGT CGGGCGAGCG CGCGGTGACG CTGAAGCTCA CCAACCAGCG CGCGGCCGCG 
ACTCCCGGCC CCGTGCGGCT CGCCAGCGCC GCCGACACGG TCGCGGCGGC GCTGGCGATC
GCCGACCCCG CACTCGACCT TGCGAATCCA TTGAAAGGCC CCTTTCGTAC CGTCGCGACG
GGTGGCGACG CCGCGGCGGC AGCGGCAATG ACGATGGCGC GCCACGCGGG GCTCCTGCCC
GCCTTCTTCG TGCGCGCGGC GGCGGGTGAG GCCGAAACGC AGTGTCGCGC CCACGATGTC
GCGACGTTGC TCGACCCCGC GCGGCTCGCC ATCGCGGCGC GCGCGCGGCT GCCCGTGGCG
GCGAGCGAGA CGGCTGAAAT CGTCGCCTTC CGCTCGCCCG AGGAGGCGTC GGACCATGTC
GCGCTCATCA TCGGTCGGCG TGACGGCAAT CCGCCCGTCG TCAGACTGCA CAGCGAATGC
CTGACGGGCG ACGTGCTCGG CAGCCTCAAA TGCGATTGCG GCCCGCAACT CCACGCCGCG
CTGCACGCGA TGGCCGACGC GCCGTGGGGC GTGCTGCTCT ATCTGCGGCA GGAGGGGCGT
GGGATCGGGC TGGTCAACAA GCTGCGTGCC TATGCGCTAC AGGACCAGGG CTATGACACG
GTCGATGCCA ATCTGCGGCT CGGCTTCCCG GTCGAGGCGC GCGATTTCGC GATTGCGGCG
CGGATGCTGG ACTTGCTGCG CATCCCGCGC ATCCGGCTGA TGACGAACAA TCCCGAAAAG
GTCGCGCGAC TGGAAAAGGA GGGCGTCGAG GTGATCGAGC GCCTGCCCCT CGCGCTGCCG
ACCAACCCGC ACAACGAGCA GTATCTCGCG ACGAAGCGCG ACCGGACGGG GCATCAGCTT
TAA
 
Protein sequence
MLLSGERAVT LKLTNQRAAA TPGPVRLASA ADTVAAALAI ADPALDLANP LKGPFRTVAT 
GGDAAAAAAM TMARHAGLLP AFFVRAAAGE AETQCRAHDV ATLLDPARLA IAARARLPVA
ASETAEIVAF RSPEEASDHV ALIIGRRDGN PPVVRLHSEC LTGDVLGSLK CDCGPQLHAA
LHAMADAPWG VLLYLRQEGR GIGLVNKLRA YALQDQGYDT VDANLRLGFP VEARDFAIAA
RMLDLLRIPR IRLMTNNPEK VARLEKEGVE VIERLPLALP TNPHNEQYLA TKRDRTGHQL