Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2672 |
Symbol | |
ID | 4081880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2818357 |
End bp | 2819259 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638011049 |
Product | GTP cyclohydrolase II |
Protein accession | YP_617710 |
Protein GI | 103488149 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.371178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.94749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGT CGGGCGAGCG CGCGGTGACG CTGAAGCTCA CCAACCAGCG CGCGGCCGCG ACTCCCGGCC CCGTGCGGCT CGCCAGCGCC GCCGACACGG TCGCGGCGGC GCTGGCGATC GCCGACCCCG CACTCGACCT TGCGAATCCA TTGAAAGGCC CCTTTCGTAC CGTCGCGACG GGTGGCGACG CCGCGGCGGC AGCGGCAATG ACGATGGCGC GCCACGCGGG GCTCCTGCCC GCCTTCTTCG TGCGCGCGGC GGCGGGTGAG GCCGAAACGC AGTGTCGCGC CCACGATGTC GCGACGTTGC TCGACCCCGC GCGGCTCGCC ATCGCGGCGC GCGCGCGGCT GCCCGTGGCG GCGAGCGAGA CGGCTGAAAT CGTCGCCTTC CGCTCGCCCG AGGAGGCGTC GGACCATGTC GCGCTCATCA TCGGTCGGCG TGACGGCAAT CCGCCCGTCG TCAGACTGCA CAGCGAATGC CTGACGGGCG ACGTGCTCGG CAGCCTCAAA TGCGATTGCG GCCCGCAACT CCACGCCGCG CTGCACGCGA TGGCCGACGC GCCGTGGGGC GTGCTGCTCT ATCTGCGGCA GGAGGGGCGT GGGATCGGGC TGGTCAACAA GCTGCGTGCC TATGCGCTAC AGGACCAGGG CTATGACACG GTCGATGCCA ATCTGCGGCT CGGCTTCCCG GTCGAGGCGC GCGATTTCGC GATTGCGGCG CGGATGCTGG ACTTGCTGCG CATCCCGCGC ATCCGGCTGA TGACGAACAA TCCCGAAAAG GTCGCGCGAC TGGAAAAGGA GGGCGTCGAG GTGATCGAGC GCCTGCCCCT CGCGCTGCCG ACCAACCCGC ACAACGAGCA GTATCTCGCG ACGAAGCGCG ACCGGACGGG GCATCAGCTT TAA
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Protein sequence | MLLSGERAVT LKLTNQRAAA TPGPVRLASA ADTVAAALAI ADPALDLANP LKGPFRTVAT GGDAAAAAAM TMARHAGLLP AFFVRAAAGE AETQCRAHDV ATLLDPARLA IAARARLPVA ASETAEIVAF RSPEEASDHV ALIIGRRDGN PPVVRLHSEC LTGDVLGSLK CDCGPQLHAA LHAMADAPWG VLLYLRQEGR GIGLVNKLRA YALQDQGYDT VDANLRLGFP VEARDFAIAA RMLDLLRIPR IRLMTNNPEK VARLEKEGVE VIERLPLALP TNPHNEQYLA TKRDRTGHQL
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