Gene Sala_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2643 
Symbol 
ID4081773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2788101 
End bp2788811 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content63% 
IMG OID638011019 
ProductExsB 
Protein accessionYP_617681 
Protein GI103488120 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG ACGCTGGCGC GCTCGTCCTT TTCTCTGGTG GGCAGGACAG CGCCACTTGT 
CTTGCCTGGG CATTGGACCG GTTCGAGACC GTCGAGACCG TCGGGTTCGA CTATGGCCAG
CGTCACCGCG TCGAACTCGA ATGCCGCGAC GATTTTCGTG CGCGCATTGT TGAATTGAAT
CCGGCATGGG CCGCGCGGCT CGGGCCGGAT CACAAGCTCG ACCTCTCGGT GCTGGGCCAG
GTCAGCGAGA CCGCGCTCAC CCGCGATGCC GAGATCGCGC TGCGCGCCGA TGGCTTGCCC
AACACCTTCG TGCCCGGTCG CAATCTGTTG TTCTTTACGC TCGCCGCTGC GCTCGCCTCA
CGCCGCGAAC TGCGGCATCT CGTCGGCGGC ATGTGCGAGA CCGACTATTC GGGCTATCCC
GATTGCCGCG ACGATACGCT CAAATCGCTC CAAGTCACGC TCAACCTCGG TATTGGCAGC
CGCTCGGTCG TCCACACGCC GTTGATGTGG CTCGATAAGG CGCAGACCTG GGGTCTGGCA
AAAATACTGG GTGGCGAGAA ACTGGTCGAC CTCATCCGCA CCGGCACTCA TACTTGCTAT
CGTGGCGACC ACGATCGCTT GCAGGACTGG GGCTACGGCT GTGGCACCTG TCCGGCTTGC
GAATTGCGCA TGAAGGGCTG GCAAGAACAT CGGAGCAGTT TGGACGAGTA G
 
Protein sequence
MTGDAGALVL FSGGQDSATC LAWALDRFET VETVGFDYGQ RHRVELECRD DFRARIVELN 
PAWAARLGPD HKLDLSVLGQ VSETALTRDA EIALRADGLP NTFVPGRNLL FFTLAAALAS
RRELRHLVGG MCETDYSGYP DCRDDTLKSL QVTLNLGIGS RSVVHTPLMW LDKAQTWGLA
KILGGEKLVD LIRTGTHTCY RGDHDRLQDW GYGCGTCPAC ELRMKGWQEH RSSLDE