| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2620 |
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| Symbol | |
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| ID | 4081575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2762372 |
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| End bp | 2763160 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010997 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_617659 |
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| Protein GI | 103488098 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATCC GCTTCGCGTC GCGCTGCCGG TCCTGCGCCG TTCGCCTCGC TAGCGCATCG
GCCTTGACCG GCACACTCGC CTCCCTCTTT CCGGCTACGA CTGTGCTGGC CACCGCGCCT
GCCGCTGTCG CGACGGCGCA TCCCTACGCT GCCCATGTTG CCGACGCCGC ACAGCGCTTC
GGCCTTCCCG AGGCATGGAT CTGGGCGGTG ATGCGCGCCG AGAGCAACGG CGATCCGGCG
GCGATTTCAC GCGCCGGCGC CATGGGGCTC ATGCAGATCA TGCCCGGCAC CTGGGGTCAG
CTCACCGCAC GCTACGGGCT CGGCGACAAC CCCTGGGATG TGCGCGCCAA TATCCATGCC
GGCGCGGCCT ATCTGCGCGA GATGGTCGAT CGGTATCGCG ATCTGTCCAC CGCGCTCGCT
GCCTATAATG CTGGGCCGGG CCGTGTCGAC GACTGGCGCC GGCGCGGCCG TCCGCTTCCC
GACGAGACGA TCACCTATGT CGCGAAGCTC GCGCCCAACC TCGGCACCTC CGGCATCGCT
TCGCCTGCCG TCGTGCCTGC AATTCCGCGC GCACCGGCTG CACCATCCTG GCACGACGCG
GCGCTGTTCG TGCTGCGTGG TGACGGCGGA TTGGATGACA GCCAAGCCGT CGCCGATCCC
GCGCCCGTAT CTCAGCCCGG CGACATTGCA TCCGCGCCTG TCTCGTTGCC CTCGGGCCTC
CCGCGGCGCC CTTCATCGCC TGGTTCGCAC GGCCTCTTCG TCCCCCTTTC CGGGCAGAGC
GAACAATGA
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| Protein sequence | MRIRFASRCR SCAVRLASAS ALTGTLASLF PATTVLATAP AAVATAHPYA AHVADAAQRF
GLPEAWIWAV MRAESNGDPA AISRAGAMGL MQIMPGTWGQ LTARYGLGDN PWDVRANIHA
GAAYLREMVD RYRDLSTALA AYNAGPGRVD DWRRRGRPLP DETITYVAKL APNLGTSGIA
SPAVVPAIPR APAAPSWHDA ALFVLRGDGG LDDSQAVADP APVSQPGDIA SAPVSLPSGL
PRRPSSPGSH GLFVPLSGQS EQ
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