| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2619 |
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| Symbol | |
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| ID | 4081574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2760382 |
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| End bp | 2762127 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010996 |
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| Product | hypothetical protein |
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| Protein accession | YP_617658 |
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| Protein GI | 103488097 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCG GCGACGATGA TTTCCGGGTT CGGCCGGGAA GGAGCCGCGA TGCTGGCAAG
GGCTCGGGAC GCAAGGTCCA GAGCCTCGCG GCACAGGTTC GCCGGGCAGC GGCCAAGGCG
GGGTACAGCC GCCGGGGGCC GTCACGCGGC AAAGGCACGG GGCGCCATGG TCGAGGCCGC
ATCGCGCGTC TGCGCACCCG CGCTCCGTCC AATGCCCGGC GCGTCGTCAT CAAGGCCCGT
GTGGTCAGGC ACAAGGGATC GAAGTTCCGC GCCGCGCCGC TCGCCCGGCA TATCGCCTAC
CTCAAGCGCG ATGGCGTGAC GCGCGACGGG CGCGATGCCA GCCTGTTTGA TGCCGGCTCA
GATCAGGCGG ACGGCGACGC CTTCGCCGAA CGCTGCGAGG ATGACCGGCA TCATTTCCGC
TTCATCGTCT CGCCCGAGGA TGCCGGCCAG ATGGCCGACC TCAAGGTGTT CACCCGCGAA
CTGATGGACG ACATGGCGGC CGATCTCGGC ACCCGGCTCG ACTGGGTCGC CGTCGATCAT
TGGAACACCG ACAATCCCCA TATCCATGTC CTCGTGCGCG GCGTCGACGA GACCGGTGCC
GATCTCGTGA TCGACCGCGA CTATATCCGC GAAGGCATGC GCGCCCGCGC GGAGGAGCGC
GTCACGATGG AACTCGGACC GCGCACCGAA CAGGAGATCC GCGCAGCCCT AGAGCAGGAA
GTTGATGCCA ATCGCTGGAC GAGCCTCGAT CACCGTCTGC AGCGCATGGC TGATGAGATG
ACCGGCATGG TCGATCTGCG TCCGGGTGGT GGCGACGATC CCGAAATGCG CCGCCTGCTG
ATCGGCCGCG CCGGCAAGCT CGAACGGCTG GGCCTTGCCT ACGGGCAAGG ACCGGCGGTC
TGGTCGCTGA GGCCCGGCGC GGAAAAGACG CTGCGCGACC TCTCCATCCG CACCGACATC
ATCAAGACCA TGCACCGGGC GATGAGCGAC GGCGGCCGCG TGCCCGATCC CGGCAGCTTC
GCTCTCCATG GTGAAGCCCC GGCCGATCCC ATCATCGGCC GCTTGGTCGA GCGCGGTCTG
CACGACGAAC TGGCGGGCAC GGCCTATGTG GTGATCGAGG GCGCCGACGG GCGAACGCAT
CATCTGCGCC TCGACGATAT GGAGATGACC GGCGACGCCA GACCCGGGGC GATTGTCGAG
ACGCGGAGCT GGCAGGACGC CAGGGGCAAT ACGCGCCTGT CGCTCGCGAC CCGCTCGGAC
CTGACCCTGG CCGAGCAGGT GAACGCGCCC GGCGCGACCT GGCTCGACCG CCAGCTCATC
GCTCGTGAGC CGGTCGCGGC CGGCAGTGGG TTCGGGCAGG ACATCCGCGA TGCGATGGAA
GCGCGCTCCC TCCATCTCGA AGGCGTCGGC CTCGCGCAGC GGCGCGGCGC CGGGTTCCTG
TTCGCGCGCG ACCTCATCGC GACCCTCAAG GGCAATGAAG TCGATCAGGC GACCGACGCC
ATCGCCCGCC GCACGGGCCT GGCGCATCGG CCGTCAGCGG CGGGTGATTA TGTGAGCGGC
GTCTATCGTG AGCGCGTGAC GCTCGCCTCA GGCCGGTTCG CGATGATCGA CAATGGGCTC
GGTTTTCAGC TCGTGCCCTG GCGGCCGGCA CTCGAACAGC ATCTGGGCAA GCATATCAGC
GGCACCATGA CGCCCGGTGG CGGCGTCGAT TGGTCGCTCG GCCGCGGAAG GGGGCTTGGC
CTGTGA
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| Protein sequence | MTVGDDDFRV RPGRSRDAGK GSGRKVQSLA AQVRRAAAKA GYSRRGPSRG KGTGRHGRGR
IARLRTRAPS NARRVVIKAR VVRHKGSKFR AAPLARHIAY LKRDGVTRDG RDASLFDAGS
DQADGDAFAE RCEDDRHHFR FIVSPEDAGQ MADLKVFTRE LMDDMAADLG TRLDWVAVDH
WNTDNPHIHV LVRGVDETGA DLVIDRDYIR EGMRARAEER VTMELGPRTE QEIRAALEQE
VDANRWTSLD HRLQRMADEM TGMVDLRPGG GDDPEMRRLL IGRAGKLERL GLAYGQGPAV
WSLRPGAEKT LRDLSIRTDI IKTMHRAMSD GGRVPDPGSF ALHGEAPADP IIGRLVERGL
HDELAGTAYV VIEGADGRTH HLRLDDMEMT GDARPGAIVE TRSWQDARGN TRLSLATRSD
LTLAEQVNAP GATWLDRQLI AREPVAAGSG FGQDIRDAME ARSLHLEGVG LAQRRGAGFL
FARDLIATLK GNEVDQATDA IARRTGLAHR PSAAGDYVSG VYRERVTLAS GRFAMIDNGL
GFQLVPWRPA LEQHLGKHIS GTMTPGGGVD WSLGRGRGLG L
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