| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2610 |
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| Symbol | |
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| ID | 4081663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2751545 |
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| End bp | 2752267 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010987 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_617649 |
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| Protein GI | 103488088 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT ATCCGCTTCG CCGCGCCCTG CTGGCCGGCG CTATCGCTCT GTCCGTCACC
GGTACGATGA CCGCCGTTCC GGCACAGGCG CAGTTCGGTT TCGGCGGCAT CGTCTATGAC
CCGACCAACT ATGCGTCGAA CGTCCTGCAG GCGGCCCGCG CGCTGCAACA GATCAACAAT
CAAATCCAGC AGATCCAGAA CCAGGCGACC AGCCTCATCA ACGAGGCGAA GAATCTCGCC
AGCCTGCCGG TCTCGACGCT GTCCACCCTC CAGAGCCAAG TCAACCAGAC CCGTCAGTTG
CTGAGCGAGG CCCAGCGCAT CGCCTATGAT GTACAGAGCA TCCAGCAAGC GTTCGACGGT
CGCTACAAGG GCGCGGCGCT CACCGGCGAT CACGCGCAGA TGGTCGCCAA TGCCAATGCG
CGCTGGGAAG ACAGCGTCGG TGCGCTCGAA GATGCGCTCC GCGTGCAGGC CGGCGTGGTG
GGCAATATTG ACGGCGCCCG CGCGTCGATC GACACGCTGG TCGGCGCCAG CCAGTCAGCG
AGCGGCGCCT TGCAGGCAGC GCAGGCCGGC AACCAGCTGC TCGCGCTCCA GTCGCAGCAG
CTCGCCGACC TCACCGCCGC AATTGCCGCC CAAGGCCGCG CCCAGGCGCT CGAATCCGCG
CGAAACGCTG CGATCGAGGC CGAAGCGCGC GAACGGTTTC GGCGTTTCCG GGGCAAGAAC
TGA
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| Protein sequence | MKKYPLRRAL LAGAIALSVT GTMTAVPAQA QFGFGGIVYD PTNYASNVLQ AARALQQINN
QIQQIQNQAT SLINEAKNLA SLPVSTLSTL QSQVNQTRQL LSEAQRIAYD VQSIQQAFDG
RYKGAALTGD HAQMVANANA RWEDSVGALE DALRVQAGVV GNIDGARASI DTLVGASQSA
SGALQAAQAG NQLLALQSQQ LADLTAAIAA QGRAQALESA RNAAIEAEAR ERFRRFRGKN
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