Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2606 |
Symbol | |
ID | 4081659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2748213 |
End bp | 2749226 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010983 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_617645 |
Protein GI | 103488084 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAGA TTTCATTTCG CAAGGCTGTT CCCGCTTTGC TGATCTCCGC GTCGGCGCTT GGCGCCTGCA CCACGACGTC GGCGAAGCCG CGCACCATCG TCCATGAAGC GCCGCGCGAG GTGTTGGCGA CCCCGGCTCC CGAGCCGGTG CCTCACGTGC GGGTCGTCGC GATCCCCGAA CCGCTGCCGC TGCCGGGCCA ATTGAAGCCG GTAGAGAGCA GCATGCCGCC ACCGGAGACG GCTGATCCGC GCCGGCGCGT GAGCACCGCC AATGCCGCGG CTCGTGTGCA GCCCTCCCGC GACGGCTATC TCAATGCGAT TCAGCAATAT CCCTGGACCG ATGGTGCGCT CTATCAGGTC TATGCCGCTC CGGGCCAGGT GACGGACATC GCGCTTCAGG AAGGCGAACA ACTTGTAGGC CCTGGGCCGG TCGCGGCGGG GGACACGGTG CGCTGGATCA TCGGCGACAC CGTAAGCGGC AGCGGCGCGA ACGCTCGCGT TCATATCCTC ATCAAACCCA CCCGGCCGGA CATCTCGACC AACCTCGTCA TCAACACCGA CCGGCGCACC TATCATCTCG AACTGCGCGC GACGCCTTCG ACCTGGATGG CCTCGGTGTC GTGGACCTAT CCGCACGATC AGCTTATCGC CCTACGGGCC GCCGAAGCCG AGCGGGCGCG CGATACGCCG TTGGCTTCGG GCATCGATAT CGCGACCCTC AATTTTCGCT ATCGGATCGA CGGGGACCGG CCCGACTGGC GGCCGGTGCG CGTGTTCGAT GATGGCCGGC AAATCTTCAT AGAATTTGCC GAAGGCGTGG AACGCACCGA CATGCCGCCG CTATTCGTCA CTGGCGACAC CGGGGCCGCC GAGCTGGTTA ATTACCGCGT GGCGGGCCGC TACATGATCG TCGACCGGCT CTTTTCCCGT GCCGAACTGC GGCTTGCGTC CGGCAAACGC GAGGCGAGGG TCAGCATCGA GCGCGAAAGC CCGCGCCGCA AGGGCCGGTC ATGA
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Protein sequence | MRQISFRKAV PALLISASAL GACTTTSAKP RTIVHEAPRE VLATPAPEPV PHVRVVAIPE PLPLPGQLKP VESSMPPPET ADPRRRVSTA NAAARVQPSR DGYLNAIQQY PWTDGALYQV YAAPGQVTDI ALQEGEQLVG PGPVAAGDTV RWIIGDTVSG SGANARVHIL IKPTRPDIST NLVINTDRRT YHLELRATPS TWMASVSWTY PHDQLIALRA AEAERARDTP LASGIDIATL NFRYRIDGDR PDWRPVRVFD DGRQIFIEFA EGVERTDMPP LFVTGDTGAA ELVNYRVAGR YMIVDRLFSR AELRLASGKR EARVSIERES PRRKGRS
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