| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2599 |
|---|
| Symbol | |
|---|
| ID | 4081652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2737923 |
|---|
| End bp | 2739020 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638010976 |
|---|
| Product | putative FecR |
|---|
| Protein accession | YP_617638 |
|---|
| Protein GI | 103488077 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG AAGAATGGCC GGCCGGCAAA GCCTCGTCAT CAAGCGATCT CGAAGCGGCA
GCCTGGTGTT TTCGCTTGAA GGAAACGCCA ACAGAGGCGC TGTTCGCCGA ATTCCGGTCT
TGGATCGATG CGTCCAAGAC CAACGCCGAG GCGTTCGCCA ATGCGATGCT GGTGGCACCG
ATGAAGCCCG CCGAGCGCGA CCGCATCGAA CAGTTTCTGG GACAACCCCT CCCTGCCCTC
GATCGATCCG GCAGCAAGGC GCGAACGGGT TCGCCAGCAG CAACGATTCA CACCTTTCCG
GCCAAGAACG ATGCAACTCC GCTCAAACCC GCAGGCCCCA GCCGCAAGGG ACGCAGATGG
GCGGCCGGCG CGATAGCGGC GGCGGCAATG GTTGCGCTGA CCGTCGGGCT CCTCCCGAAC
TTGCCGCTCC CGTGGCTCAT GTCGCAGGCC CGAGCCGAGA CCTATGCGAC GGGTCATGGA
GATATCCGGC GTTTCACGCT GGAGGACGGA TCGCTCGTGA CGCTCGACAC CGACAGCCGG
GTCGAGGTGG CAATCGACCG GAGCAAACGC CACGCCCTGC TGCGCCAGGG CCGCGCGCGC
TTCGTCGTGG CGGCCGATCC GCGCCCCTTC ACGATCCAGG CCGGGAATGG CGATGTCGTC
GCGGCCGAAG GGGCGATTGA TGTCGAGGTG GCCGGGAATG CCCACGTCGA ACTGCGCCTG
CGGTCGGGCT CGGCCAGCGT GAAGGCACGC GATACAAACG ATAAACAGAG CGAGAGCATG
CCGCTCACGA TCGACCATCC CGTCCTCTAC GCGGGAGGCG ATTTCGCGCC GCGGGTGGTT
ACGGCGCCGA CGGCTGATAC GCGCGACTGG CCGAGCGGAT GGGTGGAATA TCGCACGATC
CCGCTCGGCG AGCTTATCCG CGAGGCAAAT CGCTATGCGA AAACGCCGAT CATCCTCGAC
GATCCGAAGC TTGCGGGCCT CGCCGCGTCA GGGCGGTTCC AACTCACCGA GACGGACAGG
TTCGCAAGCC GGATCGCCGA GTTGTTCCAG CTCCGCATCT CCCGCCGGGC CGACGGCATC
CATCTCCGGC CCCAATAG
|
|---|
| Protein sequence | MSGEEWPAGK ASSSSDLEAA AWCFRLKETP TEALFAEFRS WIDASKTNAE AFANAMLVAP
MKPAERDRIE QFLGQPLPAL DRSGSKARTG SPAATIHTFP AKNDATPLKP AGPSRKGRRW
AAGAIAAAAM VALTVGLLPN LPLPWLMSQA RAETYATGHG DIRRFTLEDG SLVTLDTDSR
VEVAIDRSKR HALLRQGRAR FVVAADPRPF TIQAGNGDVV AAEGAIDVEV AGNAHVELRL
RSGSASVKAR DTNDKQSESM PLTIDHPVLY AGGDFAPRVV TAPTADTRDW PSGWVEYRTI
PLGELIREAN RYAKTPIILD DPKLAGLAAS GRFQLTETDR FASRIAELFQ LRISRRADGI
HLRPQ
|
|---|
| |