| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2579 |
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| Symbol | |
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| ID | 4081612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2719422 |
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| End bp | 2722667 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010956 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_617618 |
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| Protein GI | 103488057 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.820402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGCAA GTCTCATTGC GCTCGCCGTC CGCGCACGCT GGGCGATCCT GTTCATCTTC
CTCGCGGTCG CCGGCCTCGG CATCTGGCAG CTGACGAAGC TTCCGATTGA CGCGGTGCCG
GACATCACCA GCAACCAGGT GCAGATCAAC ACGGTCGATC CCCGCCTGTC GCCGGTCGAG
ATCGAAAAGC TTGTCACTTA CCCGGTTGAA ATTTCCCTCG CCGGCATTCC CGGGCTCGAG
ACGACACGAT CCCTATCGCG CAATGGGTTC AGCCAGGTCA CCGCCATATT TTCGGAGTCC
ACCGATCTGT ATTTTGCGCG GCAGCAGGTT GGCGAAAGGC TGAGGCAGGC CACCGAGAAC
CTGCCTGACG GCGTGCAGCC GCAGATCGGG CCGGTGACGA CCGGTCTCGG CGAGATCGTC
ATGTATACGG TCGGTTACGC CAATCCCGAC GGCAAGGGCG CGAAGAAGGT CGCCGGACAG
CCCGGTTGGC AGCCCGATGG CAGCTATCTC ACTCCGGAAG GCGACCTGCT CACCGACGAG
GTTGCAAAGG CCGGCTACCT GCGAACCGTG CAGGACTGGA TCGTCAGCCC GCAGTTGAAG
GCGGTGCCGG GCGTCGCGGG TGTCGACTCG ATCGGTGGTT ACGCGAAAAC CTTCGTCGTC
GAACCCGATC CGACCAAGCT GACCAGCTTC GGAATTTCCT ACAGCGAGCT CGGCGAGGCG
CTGGAAAAGG CCAATCTTGC CGTTGGCGCC AACTTTTTCA ACCGCGGCGG CGAAGCATAC
CTTGTCCGCG TCGATGCACG GGCGCGTTCC GTCGACGAGA TCCGCAATGC GGTCGCAGCC
ACGCGCGGCG GCGTTCCGAT CACCGTCGGC CAGATCGCCA ACGTCAAGAT CGGCGGCGAT
CTGCGCACGG GCGCGGGCAG CATGAACGGC AAGGAGGCGG TGATCGGCAC TGTCCTCATG
CTCATCAACG AGAACAGCCG TATCGTCGCG CAGGATGTTT CGGCCAAGCT CGATCAGGTT
TCGAAAACGC TGCCGCCGGG CATCGAAGTC AAGGTCGTGC TTGACCGCGC CAAGCTGGTC
AATGCGACGG TGGGGACGGT CGAACGCAAC CTGACCGAGG GTGCGCTGCT GGTCGCGGCT
TCGCTGTTTC TGCTGCTCGG CAACTGGCGC GCGGCCATTA TTGCTACCCT CGTCATCCCG
TTTTCGTTCC TCATGATGGC GATGGGGATG AACGCGTTTC GCGTGCCGGG CAATCTGATG
AGCCTTGGCG CATTGGACTT CGGCCTGATC GTCGATGGCG CCGTCATCAT TATCGAGAAC
TGTCTGGCGC GACTGGCGCA TCGTCAGGAG CACGAAGGAC GGCTGCTGAC GCTTCGAGAA
CGTCTCGAAG AGACGATGCA TGCCTCGCAG GAGATGATCA AACCGACCGT GTTCGGCCAG
GTGATCATCC TCCTCTCTTT CGCACCGCTT CTGATGTTCA CGGGGGTCGA GGGCAAGACC
TTCTCGCCCA TGGCGATCAC CATCATGCTG GCGCTTGTCT CCGCGTTCAT CCTCTCGATT
ACGCTGGTGC CCGCGCTGGT GGCGCTCCTC ATTCGCGGGC GTGTTGCCGA GAAGGAGGTG
TGGCTGATCC GCAAGAGCAA GGATCGGTAT CTGCCGCTGC TCGACAAGGC GCTCGCGCGG
CCGCGGCCGT TCATTCTCGG CGGTTTCGCC TTCTTCCTGG CGGCAGGACC GGCGTTTGCC
CTTCTCGGCT CGGAATTCAT TCCTCAGCTT GACGAAAAGA ACCTGGCGCT CGCCTCGACA
CGCGTGCCCT CGGTGAGCCT CGAACAGTCC CTGGCGATGC AGCGCAAGGT CGAGGAAGCG
GTGGCGAAGC TTCCTGAAGT GGAGCTCATG TTCTCCAAGA CCGGCACCGC CGAGGTCGCC
ACCGACCCGA TGCCGCAGAA CGTTTCCGAC GGCTTCGTCA TCCTGAAGCC GCAGGACCAA
TGGCCGGCAG GCGTCGAGAC CAAGGCTGAC GTGATCGAGC GCATCGAAAA GGCCGCCGGC
GGCCAGCTTG GTCAGCTCTA CGAGGTCAGC CAGCCCATCG AGCTGCGCTT CAACGAGCTG
ATCTCCGGCG TGCGCGGCGA CGTTGCGATC AAGCTCTATG GCGATGATCT CGACAAGATG
TCGCAGACCG CCAACGAGAT GGTGCGGGTG CTGCAGGCAA TTCCCGGCGC GAGCAGCGTG
AAGGCCGACC AGGTCGGCGG CGCGCCGGTG CTCGACGTGA AGCTCGACCG GGCGATGATC
GCGCGTTACG GGCTGACCGT CCAGGAGGTC GCCGATACGG TCGCCGCGGC ACTGGGCGGG
CGAGAATCGG GACTGCTCTA CGAAGGCGAT CGGCGCTTCG ACATCACGGT GCGCGTGCCG
GATGCAACCC GGGTCAATCT TGACGACATC CGCTCGCTCC CGGTGCTCCT GCCCGAAGAA
CCCGGAGAGA TCCGCCGCCA GGTTCCGCTC GCGCAAGTGG CGCAGATCCG GTTCACCGAA
GGACTCAATG AAATAAGACG CGAGAACGGC AAGCGCCGCG TCGTCGTCCA GTTGAACCTG
GAAGGGCGCG ATGCAGGCTC GTTCGTCCAG GAAGCGCAGG CGAAGATCGC GCAGGTGAAG
CTGCCTGCCG GCTACTATCT GGAATGGGGC GGGCAGTTCG AGAATCTGCA GGCCGCGTCG
CAGCGGTTGT CGATCGTCGT GCCTTTGTGC TTCGTGGGCA TTTTCGTGCT CCTCTATATG
GCCTTGGGAG GGTTCGGCCG GGCGGCTGCG GTCTTCCTGG CGGTGCCGCT CGGATTGGCC
GGCGGCGTGT TCACGCTCGC ACTGACCGGC ATCAACTTTT CCGTCTCGGC GGCGGTGGGG
TTCATCGTGC TGGCGGGCGT CGCGGTGCTG AACGGCCTCG TCGTGATGAC TGCGATCCGC
GAACGCATCG AGCAAGGGCT GCCGCTTGCC GAGGCCATCC GCGACGGGAT GGCCGAGAAA
ATGCGGGCCG TCATAATGAC CGGCTTTGTC CCGGCAATCG GCTTCGTGCC GATGGCGCTT
GCCCATGGAA CCGGCGCTGA AGTCCAGAAG CCGCTCGCCA CCACGGTGAT CGGTGGCCTC
ATCGCCGCAA CGATCCTGAC CCTTCTGGTC CTGCCGGCGA TCGCGAAAGT TGTGCTCGGT
GCAACCGAAG GAAGGCGCCG CAAGCGCGAA GAACAAGTCG AGCCGACCAC ACCCGAGCCG
GCGTGA
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| Protein sequence | MIASLIALAV RARWAILFIF LAVAGLGIWQ LTKLPIDAVP DITSNQVQIN TVDPRLSPVE
IEKLVTYPVE ISLAGIPGLE TTRSLSRNGF SQVTAIFSES TDLYFARQQV GERLRQATEN
LPDGVQPQIG PVTTGLGEIV MYTVGYANPD GKGAKKVAGQ PGWQPDGSYL TPEGDLLTDE
VAKAGYLRTV QDWIVSPQLK AVPGVAGVDS IGGYAKTFVV EPDPTKLTSF GISYSELGEA
LEKANLAVGA NFFNRGGEAY LVRVDARARS VDEIRNAVAA TRGGVPITVG QIANVKIGGD
LRTGAGSMNG KEAVIGTVLM LINENSRIVA QDVSAKLDQV SKTLPPGIEV KVVLDRAKLV
NATVGTVERN LTEGALLVAA SLFLLLGNWR AAIIATLVIP FSFLMMAMGM NAFRVPGNLM
SLGALDFGLI VDGAVIIIEN CLARLAHRQE HEGRLLTLRE RLEETMHASQ EMIKPTVFGQ
VIILLSFAPL LMFTGVEGKT FSPMAITIML ALVSAFILSI TLVPALVALL IRGRVAEKEV
WLIRKSKDRY LPLLDKALAR PRPFILGGFA FFLAAGPAFA LLGSEFIPQL DEKNLALAST
RVPSVSLEQS LAMQRKVEEA VAKLPEVELM FSKTGTAEVA TDPMPQNVSD GFVILKPQDQ
WPAGVETKAD VIERIEKAAG GQLGQLYEVS QPIELRFNEL ISGVRGDVAI KLYGDDLDKM
SQTANEMVRV LQAIPGASSV KADQVGGAPV LDVKLDRAMI ARYGLTVQEV ADTVAAALGG
RESGLLYEGD RRFDITVRVP DATRVNLDDI RSLPVLLPEE PGEIRRQVPL AQVAQIRFTE
GLNEIRRENG KRRVVVQLNL EGRDAGSFVQ EAQAKIAQVK LPAGYYLEWG GQFENLQAAS
QRLSIVVPLC FVGIFVLLYM ALGGFGRAAA VFLAVPLGLA GGVFTLALTG INFSVSAAVG
FIVLAGVAVL NGLVVMTAIR ERIEQGLPLA EAIRDGMAEK MRAVIMTGFV PAIGFVPMAL
AHGTGAEVQK PLATTVIGGL IAATILTLLV LPAIAKVVLG ATEGRRRKRE EQVEPTTPEP
A
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