Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2577 |
Symbol | |
ID | 4081610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2716802 |
End bp | 2718109 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010954 |
Product | outer membrane efflux protein |
Protein accession | YP_617616 |
Protein GI | 103488055 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.996623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCTA TGTTTGCGCC CGCCATGGCT GCGGCGCTCG TGGCTATATC GGTCACGCCC GCTGCGGCGC AGGTGGACAA TCGGCCAGTT GCCGGCCCTA TGGCACCATC GGCGCCGCCC GAGGTCCGCA CCGGGCCCTT ACCCGCGGTG CTAACACTCC CTCAGGCGCT TGAGGAAGCC GAAGCCCGCT CTCCAGCTCT GGTCGCGGCT CGCGCCGATG TCGAAGCCGC GCGCGGGCGT CTGCGCCAGG CACGCTTCCG GTACAATCCG ACCCTAAATG TCGAGGTCGA AAATTTTGCC GGAACGGGTC CCTATTCGGG CTTCAACGGC ACCGAAACGA CGGTCTCGGT CAATCAGAGG CTCGACATCG GCGGCAGGCG AAGAGCGCGG ATGACGCTTG CCGAGGCCGA ACTTGCTGCA CAGGAATACC GCTTCGCGAT CGCCCGTGCC GAACTTGGCC GACAAGTCCG CGATCTCTTC GCATTCGGTA TAGCCGCGCG CGACAACCTG GCGCTTGCGC GGGAAAATGA GGGGCGCGCG CGCGAGCTAT CGCGGATTGC GCGCGAACTT GTCGACGCGG GGAAGGAGCC TCCTCTGCGG GGGATGCGAG CCGACGCGGC GCTTGCCCAG GCGACAGCGG CGCTTCGGGC GGCCGAGGCT GATGAAGTGA ATGCTCGTCG CTCGCTCGCG GCGCTCTTCG GCGTAGACAC ACCGCCGGCC GAGCTGAGCG GTAGCGACCT GCTGGCACCG CCCCGGAACG TCGATGCAAT GGCGACGCTC GACGTTCGAC TTGCCGAAGC CGAGCGGGTC ATTGCTGATG CGCAATTGCG CCAGGCCCGC GCGGAGGGTC GACTCGATCC GTCCGTCGGC GTGGGAGTGC GCCAGTTGCG CGAAACCGGA GACCGGGCGC TGATTGCCAG CCTTTCGGTG CCGCTGCCGG TTTTCGATCG CAACCAAGGC AACATCGCGG CGGCGCGGTC AGAAATTCAG TCGGCCGAAG CGCGGCGCAA CCGTGTTCTC GCCAACACGC AGGCGGAAAT CGCCAACGCG CGCGCGGCAT TGGCAGCCGC CGAGGCACGC GTCATAGCGC TTGAAGGCAG CGGCATTGGG CAGGCGCGCG AAGCATTGCG GCTTGCGCAG CTATCGTATC GGGCCGGCAA ATCCTCATTG ATCGAGCTGC TCGATGCTCA GCAGGCTTAT GCTTCGACCC AGGCTGAGCT CATCGCGGCG CGACGGGCGC GGGCCGAAGC TCAGGCCACG CTGGCGCGCC AGGCTGCGGC GGCGAGCGAT GTGGATATGG GACAATGA
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Protein sequence | MHPMFAPAMA AALVAISVTP AAAQVDNRPV AGPMAPSAPP EVRTGPLPAV LTLPQALEEA EARSPALVAA RADVEAARGR LRQARFRYNP TLNVEVENFA GTGPYSGFNG TETTVSVNQR LDIGGRRRAR MTLAEAELAA QEYRFAIARA ELGRQVRDLF AFGIAARDNL ALARENEGRA RELSRIAREL VDAGKEPPLR GMRADAALAQ ATAALRAAEA DEVNARRSLA ALFGVDTPPA ELSGSDLLAP PRNVDAMATL DVRLAEAERV IADAQLRQAR AEGRLDPSVG VGVRQLRETG DRALIASLSV PLPVFDRNQG NIAAARSEIQ SAEARRNRVL ANTQAEIANA RAALAAAEAR VIALEGSGIG QAREALRLAQ LSYRAGKSSL IELLDAQQAY ASTQAELIAA RRARAEAQAT LARQAAAASD VDMGQ
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