Gene Sala_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2573 
Symbol 
ID4081606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2713165 
End bp2713815 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID638010950 
Productcation efflux protein 
Protein accessionYP_617612 
Protein GI103488051 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAT GCGATGACTG TTGCGCGGCG ACCAATGCAT CTAACGACCG TCGCTGGCGC 
CGCGCCTTAT GGATCGCGCT TGGGATCAAC GCCGGCATGT TCGCGGGCGA GATGGTGGCC
GGCCTTGCCG CAAACTCGCA GGCGCTGCAG GCCGACGCGC TCGATTTCTT CGGCGACGCC
GCCAATTATG CGATCAGCCT CGGGGTTGCC GGCATGGCAC TCGTCTGGCG TGCTCGCGCT
GCGCTCGTCA AGGGTGCGAC TCTCGGGCTT CTCGGCCTTT ACGTGCTGGT TACAACTATT
TGGGCAGTGT GGAGCGGAGC TCTGCCTGAG GCCGAATGGA TGGGTGGCGT CGGTCTTCTG
GCGCTCGTCG CCAATGGCGC AGTGGCTTTG ATGCTATACC GCTTTCGGGC GGGCGACGCC
AATATGCGCT CGGTCTGGAT CTGCTCGCGC AATGACGCGA TTGGCAATCT CGCCGTCGTC
CTCGCTGCCG CCGGCGTGTT CGGCACCGGC ACCGCTTGGC CCGATTTGAT CGTCGCGGGA
ATCATGGCGG CGCTGGGCAT CAGCGGCGGC GTCCAAATCG TGCGACAGGC CAGAGCCGAA
CTCGGCCGCT CTCGGACCGT GACAATGCAA CAAGGCAGGC AGCTCATGTG A
 
Protein sequence
MAGCDDCCAA TNASNDRRWR RALWIALGIN AGMFAGEMVA GLAANSQALQ ADALDFFGDA 
ANYAISLGVA GMALVWRARA ALVKGATLGL LGLYVLVTTI WAVWSGALPE AEWMGGVGLL
ALVANGAVAL MLYRFRAGDA NMRSVWICSR NDAIGNLAVV LAAAGVFGTG TAWPDLIVAG
IMAALGISGG VQIVRQARAE LGRSRTVTMQ QGRQLM