Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2573 |
Symbol | |
ID | 4081606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2713165 |
End bp | 2713815 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638010950 |
Product | cation efflux protein |
Protein accession | YP_617612 |
Protein GI | 103488051 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGGAT GCGATGACTG TTGCGCGGCG ACCAATGCAT CTAACGACCG TCGCTGGCGC CGCGCCTTAT GGATCGCGCT TGGGATCAAC GCCGGCATGT TCGCGGGCGA GATGGTGGCC GGCCTTGCCG CAAACTCGCA GGCGCTGCAG GCCGACGCGC TCGATTTCTT CGGCGACGCC GCCAATTATG CGATCAGCCT CGGGGTTGCC GGCATGGCAC TCGTCTGGCG TGCTCGCGCT GCGCTCGTCA AGGGTGCGAC TCTCGGGCTT CTCGGCCTTT ACGTGCTGGT TACAACTATT TGGGCAGTGT GGAGCGGAGC TCTGCCTGAG GCCGAATGGA TGGGTGGCGT CGGTCTTCTG GCGCTCGTCG CCAATGGCGC AGTGGCTTTG ATGCTATACC GCTTTCGGGC GGGCGACGCC AATATGCGCT CGGTCTGGAT CTGCTCGCGC AATGACGCGA TTGGCAATCT CGCCGTCGTC CTCGCTGCCG CCGGCGTGTT CGGCACCGGC ACCGCTTGGC CCGATTTGAT CGTCGCGGGA ATCATGGCGG CGCTGGGCAT CAGCGGCGGC GTCCAAATCG TGCGACAGGC CAGAGCCGAA CTCGGCCGCT CTCGGACCGT GACAATGCAA CAAGGCAGGC AGCTCATGTG A
|
Protein sequence | MAGCDDCCAA TNASNDRRWR RALWIALGIN AGMFAGEMVA GLAANSQALQ ADALDFFGDA ANYAISLGVA GMALVWRARA ALVKGATLGL LGLYVLVTTI WAVWSGALPE AEWMGGVGLL ALVANGAVAL MLYRFRAGDA NMRSVWICSR NDAIGNLAVV LAAAGVFGTG TAWPDLIVAG IMAALGISGG VQIVRQARAE LGRSRTVTMQ QGRQLM
|
| |