| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2569 |
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| Symbol | |
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| ID | 4081602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2707471 |
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| End bp | 2710707 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010946 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_617608 |
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| Protein GI | 103488047 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.819785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC GTATCGTCAC ATTTTCCGTC GAGCGCCGCT GGTTCGTCCT GCTCATGACG
CTCATCGCCG CGGTCATCGG AGGCTGGGCG ATCTCGCGCC TGCCGATCGA CGCCGTTCCC
GACATCACCA ACAACCAGGT GCAGGTGAAC ATCACCGCGC CCGCCCTCTC GCCCGAGCTG
GTCGAGAAGC AAATCGCCTT CCCGATCGAA ACCGCTCTCG CGGGCGTTCC TGGCCTCGAA
TATACCCGTT CACTGAGCCG CAACGGGTTC GCTCAGGTCA CGGCTGTCTT CACGGATTCG
ACCGACATAT ATTTTGCGCG CCAGCAAGTG GCGGAGCGGC TGCGTGTCGC CGAAGAAAGC
CTGCCTGACG GGGCGGTCCC GACGATGGGG CCGATCGCGA CGGGCCTCGG CGAAGTCTAT
ATGTGGACGG TCCATTTCCA GCACCGCAAG GAAGATACCC ATAGGCCGGG CGAGCCCGGT
ATGCAGCCTG ACGGCAGCTA CATCACGCCA GAGGGCGACC GGCTTGTCAG CGAGGCCGAT
CAGGCGACCT ATCTTCGGAC CGCACAGGAC TGGATTGTCG CGCCGCTCCT GAAAAACACG
CCGGGCCTTG CCGGCGTCGA CTCGATCGGC GGCTATGTGA AGCAGTTTCA GGTGATCCCC
GACGTCCAGC GGCTTGCTGC ACTTGGGCTG AACCTGACCG ATCTCGCCCG CGCTCTCGAA
GAGAATAACG TGGGCGTCGG CGCGGGCGTG GTCGATCGCG GCGGCGAGGG TCTTGCTGTG
CGCTCCGACG CGCGCATTCG CAATGTCGGC GAGCTGGCCA GCACTGTCAT CGCGACCCGC
GAAGGCACGC CGATCCGGCT CGACCAGGTG GCGCAAGTCC GCCTCGGACA AGCGATCCGC
TACGGCTCCG CGTCGGAGAA CGGCAAAGAG GTCGTCGTCG GCACCGCCAT CATGCGGATC
GGTGAAAACA GCCGCACCGT TGCCTCGGCG GTCGCGGAGC GGCTTGATGA AATCAACGCC
TCGCTGCCAG CCGACGTCGT GATTCAGCCG GTGCTAGACC GCACCGCGCT TGTAAACTCC
ACTATCAAGA CGGTAGCAAA GAACCTCACC GAAGGCGCGC TGCTCGTCAT CGTCGTGCTG
TTCGTGTTGC TTGGCAATTT CCGGGCAGCG CTGATCGCGG CGCTGGTAAT TCCGATCACC
ATGGCAATGA CTAGCTTCGG CATGTTGCGC GGCGGCGTCT CGGCCAATCT GATGAGCCTC
GGCGCGCTGG ACTTCGGCCT GATCGTCGAC GGCGCGGTCA TCATCGTCGA GAATGCGCTG
CGACGCATCG CTGAGCGGCA ACATCATTAC GGCCGCACCC TCGCACTCGA CGAGCGGCTG
TCGGTCGTAG CTCATGCCGC CCGCGAAATG ATCCGCCCGT CCGTGTTCGG GCAGGCGATC
ATCATCCTCG TCTATGTGCC CTTGCTCACG CTCACTGGCG TCGAGGGCAA GACCTTCACG
CCGATGGCGC TGACGGTCAT TATGGCGCTC GTCTTTGCCT TCATCCTGTC GCTGACCTTC
GTGCCGGCCG TGCTCGCGAT CTGGCTGTCG AAGCCGGTCG AAGAGAAGGA AGGGCGGATC
ATGACCTGGC TCAAGCACAA GTACGAGCCG GGCCTTGACC GCGCGATGAA GCGACCAACG
CTCACAATGG GCGTGGGTAT CGGCGCCTTC CTTGCCGCCA TCCTGACCTT CTCGTTCCTG
GGCCAAGAGT TCTTGCCCCA GCTTGATGAA GGCGACCTGA CCGCCCAGGT GCTCCGCGTA
CCGGGAACGT CAATCGATCA GAGTCAGGCA ATGCAGTCGC GGATCGAGCG GGAACTCGGC
AAGCTGCCCG AGGTGCGGTT CGTTTTCTCA AAGACCGGCA CGGCGGAACT TGCCGCCGAT
CCCATGCCCC CCAACATCTC CGACACCTTC ATCATCATTA AGCCGCGCGA TGAGTGGCCG
GACTCGGGGC TCAGCAAGGC CGGCTTGGTG GCGAAAGTCG AGAAGACGCT TGAAAGTCTG
CCGGGCGGCG CCTTCGAGAT CACCCAGCCC ATCCAGATGC GCTTCAACGA GCTGATCGCC
GGCGTGAGGG GCGACATCGC GGTCAAGGTG TTCGGCGACG ACACAGACGC GATGAACGCG
ACGGCCAACG CCATCGCGGC TGTCCTGCGC AAGACGGAAG GTGCCGTCGA TGTTCGGGTG
GAACAGACCG AAGGCCTGCC GATGCTTGAC ATTCGGCCGC GCCGCGACAT CATGTCGAGG
CTCGGCATCA CCGCGCAGAC CGTGCAGGAC ACCATCTCAG CCGCGATCGG CGGACGGGAC
GCCGGCATGA TCTTCGAAGG AGATCGGCGC TTCGCCATCA CCATCCGCCT GTCGGATGTG
GCGCGCGCCA ATCTGCAAAC TCTCGGCCAG GTGCCGGTGC CGCTGCCGAA TGGCGGGTTC
GTGCCGCTGC AAAGCGTCGC CGACATTGGC GTGACCGATG GCCCCAACCA GATCAGCCGC
GAAAATGGCA AGCGGCGGGT CGTCGTGCAG GCGAACGTGC GCGGTCGTGA CGTGGCGGGC
GTGGTTGCGG ACGCGCAGGC CGCTATCGCG AGCGAGGTGC GTCTCTCCAC CGGGCAATAT
CTCGATTGGG GCGGCCAGTT CGAGAACCTG CAATCGGCGA GCGAGCGGCT GATGCTCGTG
GTTCCGGCCT GTTTCGCGCT CATCATCCTT CTGCTCTACG GGGCCTTGGG AAGCATGCGC
GATGCAGCGA TCGTCTTCAC CGGCGTGCCG TTGGCGCTGG TGGGCGGCGT GCTTGCCTTG
TTCCTGCGGG GCATGCCCTT CTCGATCTCC GCGGCGGTCG GCTTCATTGC CCTGTCCGGC
ATTGCGGTCT TGAATGGACT CGTCATGGTC ACATCGATTC AGGAGCTGAT GGCCCGAGGC
ATGGAGCGCG CGAAAGCCGC CCGTGAAGGC GCCATGATGC GTTTGCGCCC CGTGGTCATG
ACGGCGCTGG TCGCGTCACT CGGATTCGTG CCGATGGCGA TCGCCTCGGG TGCTGGCGCC
GAAGTTCAAA AGCCGCTGGC GACGGTGGTC ATCGGGGGGC TCATCTCGGC GACCCTGCTG
ACGCTGTTCC TGCTGCCGAC GCTCTACGCG CGCTACGGGC GCAGGGAGAC GGATATTCCG
CCGCCGGACA AGCGGTCCGA CCCGGGATTG TCCAATCTCG TCAAGGCTTC CCTGTGA
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| Protein sequence | MIDRIVTFSV ERRWFVLLMT LIAAVIGGWA ISRLPIDAVP DITNNQVQVN ITAPALSPEL
VEKQIAFPIE TALAGVPGLE YTRSLSRNGF AQVTAVFTDS TDIYFARQQV AERLRVAEES
LPDGAVPTMG PIATGLGEVY MWTVHFQHRK EDTHRPGEPG MQPDGSYITP EGDRLVSEAD
QATYLRTAQD WIVAPLLKNT PGLAGVDSIG GYVKQFQVIP DVQRLAALGL NLTDLARALE
ENNVGVGAGV VDRGGEGLAV RSDARIRNVG ELASTVIATR EGTPIRLDQV AQVRLGQAIR
YGSASENGKE VVVGTAIMRI GENSRTVASA VAERLDEINA SLPADVVIQP VLDRTALVNS
TIKTVAKNLT EGALLVIVVL FVLLGNFRAA LIAALVIPIT MAMTSFGMLR GGVSANLMSL
GALDFGLIVD GAVIIVENAL RRIAERQHHY GRTLALDERL SVVAHAAREM IRPSVFGQAI
IILVYVPLLT LTGVEGKTFT PMALTVIMAL VFAFILSLTF VPAVLAIWLS KPVEEKEGRI
MTWLKHKYEP GLDRAMKRPT LTMGVGIGAF LAAILTFSFL GQEFLPQLDE GDLTAQVLRV
PGTSIDQSQA MQSRIERELG KLPEVRFVFS KTGTAELAAD PMPPNISDTF IIIKPRDEWP
DSGLSKAGLV AKVEKTLESL PGGAFEITQP IQMRFNELIA GVRGDIAVKV FGDDTDAMNA
TANAIAAVLR KTEGAVDVRV EQTEGLPMLD IRPRRDIMSR LGITAQTVQD TISAAIGGRD
AGMIFEGDRR FAITIRLSDV ARANLQTLGQ VPVPLPNGGF VPLQSVADIG VTDGPNQISR
ENGKRRVVVQ ANVRGRDVAG VVADAQAAIA SEVRLSTGQY LDWGGQFENL QSASERLMLV
VPACFALIIL LLYGALGSMR DAAIVFTGVP LALVGGVLAL FLRGMPFSIS AAVGFIALSG
IAVLNGLVMV TSIQELMARG MERAKAAREG AMMRLRPVVM TALVASLGFV PMAIASGAGA
EVQKPLATVV IGGLISATLL TLFLLPTLYA RYGRRETDIP PPDKRSDPGL SNLVKASL
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