Gene Sala_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2560 
Symbol 
ID4081475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2699576 
End bp2700220 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID638010937 
Producthypothetical protein 
Protein accessionYP_617599 
Protein GI103488038 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGACT CGGATGAAGC AGGCGGCTGC GGCTGCACCG GAGACAGCGC GCGGGCGGAA 
AAGGATCCGG CCTACCGGCG TGCGCTGTGG ATCGTCGTGC TCCTCAATCT CGGTTTCGGC
GCCTGCGAGA TCGTCGGCGG GTTCATTGCC GACAGCCAAG CGCTCAAGGC CGACGCGCTC
GACTTCATGG GCGACGGGAC GATCACGTTA GTCGGCCTGA TTGCGCTCGG CTGGACTGCG
GCGGCGCGCG CACGGATTGC GCTCGTTCAG GGAATATTCC TCCTCACGTT GGGTCTCGGC
GTGATCGCTG TGGCGCTCTG GCGCGCCTTG ACTGCTGTCG CGCCCGAAGC CGACTTGATG
GGCGGCATCG GCGTCGCTGC GCTTGTCGTC AATGTCGCAT CGGCCTTCGT CTTGTCGCGC
TTCCGTGAAG GGGACGCAAA TGTGCGCGCG GTCTGGCTGT TCAGCCGCAA CGATGCGCTC
GCCAATGTTG CCGTGATCGT CGCGGCAGCG CTCGTCGCCT GGACAGGGAG CGCCTGGCCC
GATCTGACGG TTGCCGCCGT GATCGCGGCC CTCTTCCTCC ACTCCGCCTA TGAAATCCTC
CGCGGCGCGC GTACCGAGCT GCGCGAGTTG ACGCAGACGG CTTGA
 
Protein sequence
MVDSDEAGGC GCTGDSARAE KDPAYRRALW IVVLLNLGFG ACEIVGGFIA DSQALKADAL 
DFMGDGTITL VGLIALGWTA AARARIALVQ GIFLLTLGLG VIAVALWRAL TAVAPEADLM
GGIGVAALVV NVASAFVLSR FREGDANVRA VWLFSRNDAL ANVAVIVAAA LVAWTGSAWP
DLTVAAVIAA LFLHSAYEIL RGARTELREL TQTA