Gene Sala_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2558 
Symbol 
ID4081473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2698368 
End bp2698787 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content66% 
IMG OID638010935 
ProductMerR family transcriptional regulator 
Protein accessionYP_617597 
Protein GI103488036 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC GGCTGGCGAT CGGTGATCTG GCGCGGCAGA CCGGAACCAA GGTCAACACG 
ATCCGCTTCT ATGAGGAGAT CGGCCTCCTC CCGCGGGCCA TGCGTACCGC CTCGGGACGA
CGAACCTATG GCACAGCGGA CGTGCGCCGC CTCGCCTTCA TCCGGCACGG TCGTGGCCTT
GGCTTCTCGG TCGAGGAGGT CCGCTCACTC CTGGCACTTG CCGACGAACC GGAACGCGAC
TGTGCCGAGG CGGCGGCAAT TGCACGCCGC CATCTTCGGG ACATCGCCAT GCGCATCGCA
CAGCTTGAGA CGCTGCGTGA TGCGCTCGCC GAGGTCGCTG TTTCCTGTGA GGGCGGCCGC
GCGGCCGATT GCCGCGTGAT CGAAGCGATT GCTGGCGCAG AACTGTCGGT CGAGGCCTGA
 
Protein sequence
MIKRLAIGDL ARQTGTKVNT IRFYEEIGLL PRAMRTASGR RTYGTADVRR LAFIRHGRGL 
GFSVEEVRSL LALADEPERD CAEAAAIARR HLRDIAMRIA QLETLRDALA EVAVSCEGGR
AADCRVIEAI AGAELSVEA